| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_3407 |
|---|
| Symbol | |
|---|
| ID | 6139455 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | - |
|---|
| Start bp | 3618032 |
|---|
| End bp | 3618841 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641629115 |
|---|
| Product | hydroxypyruvate isomerase |
|---|
| Protein accession | YP_001756068 |
|---|
| Protein GI | 170749808 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3622] Hydroxypyruvate isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.743274 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0000181243 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGACGCGAC CCATGAAGCT CGGGGCCTAC AAGGATCGTC TCAGCGGCCA TTGCGGCTTC
CTGTTCACGG AGCTGCCGCT GGCCGAGCGC TTCGCGGCGG CGGCCCGGGC AGGGTTCCGC
GCCGTCGAGC ACCCCAACCT GTTCGCGACG CCGGCCCGCG AGGTCGCGGG CTGGCTGGAG
CGGGCCGGCG TTCCGCTGGT CCAGACCGGC TTCCCGGCGG GGGACGCCGC CAAGGGCGAG
AAGGGGTTCG CGGCCCTGCC CGACCGGATC GACTACTACC GCTCCACGAT CGAGCCGACC
CTGGACTACG TCGCGCAGCT CGGCTGCCGG ATGGTTCACC CGATGGCGGG CGTCCGGCCT
GCCGGGGTCG AGCGGGCGCG GCTCTGGGAC ACCTACCTCG ACAACCTCGC CTTCGCGGCC
GACGCCGCCG GCGCGCGGGG CATGACGGTG ATCGTCGAGC CGATCGGCCC CGGCTCGATC
GCCGACTACG TGATCGACGA CCCGCTGGTT GCGGTCGAGG CGATCCGGGC GATCGGTCGC
GACAACGTCA AGCTCCTGTT CGACGCCTAT CACTGCGTCT GCCTCGGCCA CGATCCGGCG
GCGCTGATCC GGGCGCACGC GCCGCTCATC GCCCATGTCC AGATCGCCGA CGACCCCGGG
CGGCACGAGC CCGGGACCGG CACGATCGCC TTCGACCCGA TCTTCGCCGC CCTGGAGGAG
GTCGGCTATT CCGGCTTCGT CGGCTGCGAG TACCATCCCG CGGCCGGCAC CGAGGCGGGG
CTCGGCTGGA TGAGGGCGGA CGCGGCGTAG
|
|---|
| Protein sequence | MTRPMKLGAY KDRLSGHCGF LFTELPLAER FAAAARAGFR AVEHPNLFAT PAREVAGWLE
RAGVPLVQTG FPAGDAAKGE KGFAALPDRI DYYRSTIEPT LDYVAQLGCR MVHPMAGVRP
AGVERARLWD TYLDNLAFAA DAAGARGMTV IVEPIGPGSI ADYVIDDPLV AVEAIRAIGR
DNVKLLFDAY HCVCLGHDPA ALIRAHAPLI AHVQIADDPG RHEPGTGTIA FDPIFAALEE
VGYSGFVGCE YHPAAGTEAG LGWMRADAA
|
|---|
| |