| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_3405 |
|---|
| Symbol | |
|---|
| ID | 6139453 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | + |
|---|
| Start bp | 3614394 |
|---|
| End bp | 3615431 |
|---|
| Gene Length | 1038 bp |
|---|
| Protein Length | 345 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641629113 |
|---|
| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
|---|
| Protein accession | YP_001756066 |
|---|
| Protein GI | 170749806 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.00255114 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGGCGGTCC GCAAGCGCGT CTGCCGATTC AACGTCTGGA TCAACCCGGT CTTCGACGCG
CGCCTGGGGG CCGAGCCCGA CATCGACCTG CAGGTCGGCG ACCTGCAGGG ACCGGAGGAC
GCGCTCGCCG CGCTGCTGGC GCGGGCCCAC GTCCTCCACG TCTCGCCGGC GCGGGACGAG
CTGCCGCGCC GCTGGCACGT GACCGACGCG CTGCTCGCCG AATGCCCCGA CCTCCTGGCG
GTCTCGTCGG CCGGGGCGGG CTTCGACACG GTGGACGCCG CCGCCTGCAC CCGGGCCGGC
GTCGCGGTGG TGAACCAAGT GGGCGGCAAT GCCCGCTCGG TGGCCGAGCT GGCGATCGGC
CTGATGCTCG CCGTCTCGCG CAAGATCTGC GTCTCGGACC GGCTGCTCCG GACCGCGCGC
GGCTTCACCC GCGAATCGCT CATGGGCCAC GAGATCGGCG GCGCGACCCT GGGCCTGATC
GGGATCGGCC ATACCGGCCG GGAGGTCGCC AAGCTGGCCC GCGGCTTCGA CATGCGGGTC
TTCGCCCACG ACCCCCTGCT CTCGGGCGAT GAGATCCGGG CCCGCGGCGC GGAGCCGGTC
GACCGGGCGC GACTGCTCGC CGAGTCCGAC ATCGTGTCCC TGCACTGCCC CCTCGACGAC
ACGACCCGCG GCAGCTTCGA CGCCGAGAGC TTCGCGGCGA TGAGGCCGGG GGCACTGTTC
ATCACCACCG CCCGCGGCGG CGTCCACGAC GAGGCCGCGC TCGCCGCGGC GCTGACCGCC
GGCCACCTCG CGGGGGCGGG CCTCGACGTC TGGTCGCCGG AGCCGCCGCC CCTCAACGCG
GCCCTGCTGC AGCTCGACAC CGTGGTGGCG ACCTACCACA CCGCCGGCGT CACCCACGAG
GCACGGCGCA ACGTGGCCGC CTGGGGGGCC GAGCAGATCG TCGGCCTGCT CCGCGGCGAG
ACGCCGCCGC GCCTCGTCAA TCCGGAGGTC TGGCCCGCCG TGCTGGAGCG CCGGGCGGTG
CTGTTCGGCG ACGCGTGA
|
|---|
| Protein sequence | MAVRKRVCRF NVWINPVFDA RLGAEPDIDL QVGDLQGPED ALAALLARAH VLHVSPARDE
LPRRWHVTDA LLAECPDLLA VSSAGAGFDT VDAAACTRAG VAVVNQVGGN ARSVAELAIG
LMLAVSRKIC VSDRLLRTAR GFTRESLMGH EIGGATLGLI GIGHTGREVA KLARGFDMRV
FAHDPLLSGD EIRARGAEPV DRARLLAESD IVSLHCPLDD TTRGSFDAES FAAMRPGALF
ITTARGGVHD EAALAAALTA GHLAGAGLDV WSPEPPPLNA ALLQLDTVVA TYHTAGVTHE
ARRNVAAWGA EQIVGLLRGE TPPRLVNPEV WPAVLERRAV LFGDA
|
|---|
| |