| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_3379 |
|---|
| Symbol | |
|---|
| ID | 6139427 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | - |
|---|
| Start bp | 3587916 |
|---|
| End bp | 3588815 |
|---|
| Gene Length | 900 bp |
|---|
| Protein Length | 299 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641629087 |
|---|
| Product | porin |
|---|
| Protein accession | YP_001756040 |
|---|
| Protein GI | 170749780 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3637] Opacity protein and related surface antigens |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.332912 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAGC TTCTCACCTC TCTCGCGGCG TTCACCGCGC TCACGGCTGC CGCTTCGGCC
GCCGATCTGC CGCGCCGCGC CGCGCCGCCG CCGGTGTTCA CCCCCGTTCC GGTGTTCACC
TGGACCGGTG CCTACTTCGG TATCAACGCC GGCTACGCGT TCGACGCCAG CAGCAACTCC
ACCCGCGGCT TCGTCCAGAC GCCCGGCAAC CCGGTCGCGC TGGTGCCGGG CGGTCTCGTC
CCCTATCAGG CCCTGCTGCC GAACGGCTCG TCGCTGATCT ACAGCAACGA CAGCCGCGAA
GGTTTCTCGG GCGGTGGCCA GATCGGCTAC AACTGGCAGC TGACCCCGGG CTCCGGCGCC
GTGATCGGCT TCGAGGCTGA CGCCCAGTAC CTCGACTTCG GCCGTCGCGC CCGCTTCGCC
ACGAACGCCG CGGCGATCAA CCCGGGCTTC ATCCCGGTCA ACGGCACGCT CAACACCATC
GACTTCTTCG GCACCGTCCG CGGTCGTCTC GGTTACGCCT TCGACCGGAC CCTCGTGTAC
GCCACGGGTG GTTTCGCCTA CGCCACCGGC ACGGATGACG GCGCTCGCGT CGGCCTGCAG
AACTTCGCCG GCCGCCGGAA CGACTTCAAG ACCGGCTGGA CCGTCGGCGG CGGTGTCGAG
TACGCCCTGC CCACCGACTC GTTCCTGAAC TTCTTCCGCT CCTCGGCCGT GACGCTGAAG
GTGGAAGGCC TGTACGTGAA CCTCGACAAC AACAACGGCC GCGCCCAGGC GCCGCTGGTC
GGCGCCGCGA TCTCCCCGGT CGGCCTGGTG CCGGTGTACT CGCTCGCCGG CGCCAGCCGG
AACGAGAACG CCTTCGCCGT CGTCCGCGCC GGCCTGAACT ACAAGTTCGG CTCGTACTGA
|
|---|
| Protein sequence | MKKLLTSLAA FTALTAAASA ADLPRRAAPP PVFTPVPVFT WTGAYFGINA GYAFDASSNS
TRGFVQTPGN PVALVPGGLV PYQALLPNGS SLIYSNDSRE GFSGGGQIGY NWQLTPGSGA
VIGFEADAQY LDFGRRARFA TNAAAINPGF IPVNGTLNTI DFFGTVRGRL GYAFDRTLVY
ATGGFAYATG TDDGARVGLQ NFAGRRNDFK TGWTVGGGVE YALPTDSFLN FFRSSAVTLK
VEGLYVNLDN NNGRAQAPLV GAAISPVGLV PVYSLAGASR NENAFAVVRA GLNYKFGSY
|
|---|
| |