Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrad2831_3362 |
Symbol | |
ID | 6139410 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium radiotolerans JCM 2831 |
Kingdom | Bacteria |
Replicon accession | NC_010505 |
Strand | - |
Start bp | 3569131 |
End bp | 3570129 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | 641629070 |
Product | TRAP transporter solute receptor TAXI family protein |
Protein accession | YP_001756023 |
Protein GI | 170749763 |
COG category | [R] General function prediction only |
COG ID | [COG2358] TRAP-type uncharacterized transport system, periplasmic component |
TIGRFAM ID | [TIGR02122] TRAP transporter solute receptor, TAXI family |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0884862 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATTCT ATTCTCCAGC CTGCCCGGCC ACGGCCGGCG CTGCCGGACC GTCCCGCGCA ATCGGCAGGC GGGGCCTGCC CCTTCGGCCG ACTCGTCGGG CCGCTCTGCT GGCGGGCCTC GGCCTGATCC TGGCGCCGCC GGCGCGCGCC GCCGAGGCGC TCCGCCTCGT GCTCGCCACC GCGACGCCCG GCGGCGGCTT CCCGGCCTTC GGGGAGACCT TCGCCGGCGC GATCGCGGCC GCGGACCCGG CCCTGACCGT CGAGCGGCGT GCCACCGGCG GCTCGTCCGA GAATGTCGGC CTCCTCCGCG CCGGCCGCGT CGATCTCGGC CTCGTGCAGG GGGAGTACGC CTATCCCGCC CTCGCCGAGG GCGGCGGCCT GACCGTTCTG GCGCCGATGT ACCCGACGCC GGGCCTGTTC GTGGTGCCGG CCGGCAGCGC GATCCGCTCG GTGGCGGATC TGCGCGGGCG CAGGGTCGTC CTCGGCACGC ACAAGTCCGG GCTCACCGTC ATGGGCCGGA GCGCCCTCGG CGCCTCCGGG CTCGATCCCG AGCGCGACAT CAGCCCGATC CTGCTCGACC GGGCCGGCGA CGGTCCGACA CTGGTGCGGG AGGGCCGCGC CGACGCGCTC TGGGGCGGCG GCCTCGACTG GCCGGGCTTC CGCGCCCTGG CCTCGGATCC CGGCGGAGCC CGCTTCTTCG GACCGTCCGA GGCGGGCATT GCGCGCCTCG CGCAGCCCGG CGCGGCGACG CGGCGTCTCA CGGTTCCGGC CGGCAGCTTC GCCGGGCAGG CGGAGCCGAT CGAGACGGTC GGATCCTGGA GCTTCGTGCT CGCGAGGCCC GGCCTCGACG AGGAGACGGC CTACCGCGTC GTGAGTGCGC TGGCGCGGAC CGATCTCACC ACCGCCCGGC CGAGGAACCT CGTCGGCCTC GTCCCGGCGG ATCGGGTCAA TCCCGGGACC GCCCGCTTCC TCCGCGAGGC CGGCGTGACG CTGCGCTGA
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Protein sequence | MEFYSPACPA TAGAAGPSRA IGRRGLPLRP TRRAALLAGL GLILAPPARA AEALRLVLAT ATPGGGFPAF GETFAGAIAA ADPALTVERR ATGGSSENVG LLRAGRVDLG LVQGEYAYPA LAEGGGLTVL APMYPTPGLF VVPAGSAIRS VADLRGRRVV LGTHKSGLTV MGRSALGASG LDPERDISPI LLDRAGDGPT LVREGRADAL WGGGLDWPGF RALASDPGGA RFFGPSEAGI ARLAQPGAAT RRLTVPAGSF AGQAEPIETV GSWSFVLARP GLDEETAYRV VSALARTDLT TARPRNLVGL VPADRVNPGT ARFLREAGVT LR
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