| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_3266 |
|---|
| Symbol | |
|---|
| ID | 6139314 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | + |
|---|
| Start bp | 3459818 |
|---|
| End bp | 3461101 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641628976 |
|---|
| Product | TRAP dicarboxylate transporter, DctM subunit |
|---|
| Protein accession | YP_001755929 |
|---|
| Protein GI | 170749669 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1593] TRAP-type C4-dicarboxylate transport system, large permease component |
|---|
| TIGRFAM ID | [TIGR00786] TRAP transporter, DctM subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.341254 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGCC TGATCATCTT CGGGCTGCTC ATCGCCCTCA TGCTCACCGG CATGCCGATC
TCGATCGCGC TCGGCCTGAC GGTGCTGACC TTCCTGTTCA CGCTGACGCA GGTGCCGATC
GAGAGCGTCG CGCTCAAGCT GTTCACCGGG ATCGAGAACT TCTCGATCAT GGCGATCCCG
TTCTTCATCC TCGCCGGCAA CTTCCTGGCC CATGGCGGCG TGGCGCGGCG GATGATCGCC
TTCACGACCT CGCTCGTCGG GCACTGGCCG GGCGGCCTCG GCCTCGCGGG CGTGGTCGCC
TGCGCGCTGT TCGCCGCCGT GTCGGGATCG AGCGTGGCGA CGGTCGTGGC GATCGGCTCG
ATCATCCTGC CGGCCATGGT GGCCGAGGGC TACCCGCGGC GCTTCGGCGC CGGGGTGATC
ACCACGTCGG GGGCGCTCGG CATCCTCGTG CCGCCCTCGA TCATCCTCGT GCTCTACGGG
GTGTCGACGA ATTCCTCAAT CGGCAACCTG TTCCTGGCCG GGGTGATGCC CGGCATCGTC
CTGTCGGCGA TGCTGGCGAC CGTCACCTTC GTCATCGCCA AGCGCCGGGG CTATCCGCGC
ATGCCCAGGG CCTCCTGGGC CGAGCGCCTG CGCGCCTTCC GCGAGAGCGC CTGGGGCCTG
TTCCTCGTGG TGATGGTGAT CGGCGGCATC TACGCGGGCA TCTTCACGCC GACCGAGGCG
GCGGCGACCG CCGCCGTCTA CGCCTTCGTC ATCGCGGTGT TCGTCTACCG CGACCTGAAG
CTGTCGGACG TGCCTCGGGT GCTCCTCGCC TCCGCCAACA TGAGCGCGAT GCTGCTCTAC
ATCATCACCA ACGCGGTGCT GTTCTCGTTC CTGATGACCT CCGAGAACAT CCCGCAGACG
ATGGCGGCGT GGCTGATCGC CATGAACTTC AGCCCGCTGG TCTTCCTGCT CGTCGTCAAC
ATCATCCTGC TGATCGCCGG CAACGTGATG GAGCCGTCCT CGATCCTGCT GATCATGGCG
CCGATCCTGT TCCCGATCGC CGTCAAGCTC GGGATCGATC CGATCCATTT CGGGATCATC
ATGGCGGTCA ACATGGAGGT CGGCCTGTGC CACCCGCCGG TCGGGCTCAA CCTCTACGTG
GCCAGCGGCA TCGCCCATAT GGGCATCTCC GAGCTGACGG TGGCGGTGCT GCCCTGGCTC
CTGACGATGC TGGCCTTCCT GGTCCTGGTG ACCTACTGGC CGGCCCTCTC CCTGTGGCTC
CCGCGGGCGC TCGGGGCGAT GTGA
|
|---|
| Protein sequence | MSGLIIFGLL IALMLTGMPI SIALGLTVLT FLFTLTQVPI ESVALKLFTG IENFSIMAIP
FFILAGNFLA HGGVARRMIA FTTSLVGHWP GGLGLAGVVA CALFAAVSGS SVATVVAIGS
IILPAMVAEG YPRRFGAGVI TTSGALGILV PPSIILVLYG VSTNSSIGNL FLAGVMPGIV
LSAMLATVTF VIAKRRGYPR MPRASWAERL RAFRESAWGL FLVVMVIGGI YAGIFTPTEA
AATAAVYAFV IAVFVYRDLK LSDVPRVLLA SANMSAMLLY IITNAVLFSF LMTSENIPQT
MAAWLIAMNF SPLVFLLVVN IILLIAGNVM EPSSILLIMA PILFPIAVKL GIDPIHFGII
MAVNMEVGLC HPPVGLNLYV ASGIAHMGIS ELTVAVLPWL LTMLAFLVLV TYWPALSLWL
PRALGAM
|
|---|
| |