Gene Mrad2831_3175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_3175 
Symbol 
ID6139222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp3353875 
End bp3356061 
Gene Length2187 bp 
Protein Length728 aa 
Translation table11 
GC content71% 
IMG OID641628886 
Product1A family penicillin-binding protein 
Protein accessionYP_001755840 
Protein GI170749580 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0744] Membrane carboxypeptidase (penicillin-binding protein) 
TIGRFAM ID[TIGR02074] penicillin-binding protein, 1A family 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAAGG GTCGGGGCAG GATTGAGCCG AACTTCGACG TGCCCGAGGG GCGCGCGCGG 
GATCGCGGCG AACTCGACCT GCGCCTGACT CGGGAAGACC GGCCGGGAGC AGGAGACGGC
GTGGCGAAGC GATCGGGCGG CGGAGCGCGG CAGCCGAACA AGGCGCCGGC GCGGACCACG
GGGCGAGCGA AGGCCTCGGG TCGCGGACGA CGCCGGCGTT CCTGGCTCGG CCGCATCGTC
TACGGCACCG TCGTCCTCGG CCTCTGGGGT GTGATCGGGC TCGCCGGCCT CATCGCCTAC
CACGCGTCGC AACTGCCGCC GATCGACCAG CTCGCGGTGC CGAAGCGGCC GCCCAACATC
GCCATCCTGG CGAGCGACGG CTCGCTGCTC GCCAATCGCG GCGAGACCGG CGGCCGTGTG
GTGTCGATCA AGGAGCTGCC GCCCTACCTG CCGCGCGCCT TCGTGGCGAT CGAGGATCGG
CGCTTCTACC AGCATTTCGG CGTGGATCCC GTCGGCATCG TCCGGGCCAT CGGCCAGAAC
CTGACCCGTC GCGGCGTGGC GCAGGGCGGC TCGACCCTGA CCCAGCAGCT CGCCAAGAAC
CTGTTCCTGA CCCCGGAGCG CTCGGCCTCG CGCAAGATCC AGGAGGCGAT CCTCGCGCTC
TGGCTCGAGC ACAAGTACAC CAAGGACGAG ATCCTCGAAC TCTACCTGAA CCGCGTCTAT
TTCGGCGCCG GCGCCTACGG CGTCGAGGCG GCGGCGCAGC GCTATTTCGG CAAGCCCGCC
AAGGAGGTGA GCCTCGCGCA GGCCGCGATG CTCGGCGGGC TCGTGCAGGC GCCCTCGCGC
CTCGCCCCGA ACCGCAACCT GCCGGCCGCC CAGGCCCGCG CCGCCCAGGT CCTCGCCGCC
ATGCAGGAGC TGGGCTTCGC GTCGGCGCAG GACGTCAAGG TTGCGCTCGC CCAGCCGGCG
AAGCCCGCCA ACGCCCGCGG CGGCGGGTCG GCCAACTACG TCGCCGACCT CGTGATGGAC
GTGCTCGACG ATTACGTCGG CAAGTTCGAC ACCGACATCA CGGTCCAGAC CACCGTCGAT
CCCAGCCTCC AGGCGGCGGC CGAGAAGGCG CTGACCGACG AGCTCAACGC GAAGGGGACG
CGCTACAACG TCAGCCAGGG CGCCCTGGTC TCGATGCGGC CCGACGGCGC CATCCGCGCC
CTGATCGGCG GCCGCGACTA CGCGCAGAGC CAGTTCAACC GGGCCACGAC CGCCAAGCGT
CAGCCCGGCT CCTCGTTCAA GCCGTTCGTC TACCTCGCGG CCGTGGAGCA CGGCGCCACG
CCCGACACGG TCCGGGAGGA CGCGCCGATC CGGATCGGCA ACTGGGCGCC GGAGAACTAC
TCCCACCGCT ATGAGGGCCC CGTCACGCTG CGGACGGCGC TCGCCCAGTC GCTCAACACG
GTCGCGGTGC GCCTCGGCCA GGAGGTCGGT CCGAAGACCG TGGTCCAGAC CGCCCAGCGC
CTCGGCATCA CCTCGCCGCT CCAGGCCAAC GGGTCCATCG CCCTCGGTAC GTCCGAGGTC
ACGCTCCTGG AGATGGTCGG CGCCTACGGG GCCTTCGCCA ACGGCGGCAT CGGCGTGATC
CCGTACGTCG TCACCGCCGT GAAGAGCCAG GACGGGAAGG TGCTCTACAA GCGCTCCGAC
AACGGTCTGG GCCGGGTCAT CGACGCCAAC GCCGACGGCA TGATGAACGC CATGATGCAC
GAGACCTTCG TGAGCGGCAC CGGCAAGAAG GCCGACATCC CCGGCTGGGA CCTCGCGGGG
AAGAGCGGCA CCACGCAGGA TTACCGCGAC GCGTGGTTCA TGGGCTTCTC GGGCAGCCTC
GTGACCGGGG TCTGGCTCGG CAACGACGAC GGCGAGCTCA CCAAGAAGGT CACCGGCGGC
AACCTGCCGG CGGAGATCTG GAAGACCTAC ATGACCCAGG CGCTGAAGGG GCAGACGCCG
GTCCCGCTCC CGGGCCTGAA TCGCTGGCGC CGGCAGCCGG AGACGACCGC CTCGGTGGCG
AGCGCCGCCC CGGCTGGCCC GGGCGGGCTC CTCGGTCAGA TCCTCGGCGA GCCGGAGGCG
CCGGCGCCGC GCCAGGCCGC GCCGGCACGG CGCGCCCAGA AGGATGACCG CAACTTCATC
GAGAAGCTGT TCGGCATCGG GGACTGA
 
Protein sequence
MAKGRGRIEP NFDVPEGRAR DRGELDLRLT REDRPGAGDG VAKRSGGGAR QPNKAPARTT 
GRAKASGRGR RRRSWLGRIV YGTVVLGLWG VIGLAGLIAY HASQLPPIDQ LAVPKRPPNI
AILASDGSLL ANRGETGGRV VSIKELPPYL PRAFVAIEDR RFYQHFGVDP VGIVRAIGQN
LTRRGVAQGG STLTQQLAKN LFLTPERSAS RKIQEAILAL WLEHKYTKDE ILELYLNRVY
FGAGAYGVEA AAQRYFGKPA KEVSLAQAAM LGGLVQAPSR LAPNRNLPAA QARAAQVLAA
MQELGFASAQ DVKVALAQPA KPANARGGGS ANYVADLVMD VLDDYVGKFD TDITVQTTVD
PSLQAAAEKA LTDELNAKGT RYNVSQGALV SMRPDGAIRA LIGGRDYAQS QFNRATTAKR
QPGSSFKPFV YLAAVEHGAT PDTVREDAPI RIGNWAPENY SHRYEGPVTL RTALAQSLNT
VAVRLGQEVG PKTVVQTAQR LGITSPLQAN GSIALGTSEV TLLEMVGAYG AFANGGIGVI
PYVVTAVKSQ DGKVLYKRSD NGLGRVIDAN ADGMMNAMMH ETFVSGTGKK ADIPGWDLAG
KSGTTQDYRD AWFMGFSGSL VTGVWLGNDD GELTKKVTGG NLPAEIWKTY MTQALKGQTP
VPLPGLNRWR RQPETTASVA SAAPAGPGGL LGQILGEPEA PAPRQAAPAR RAQKDDRNFI
EKLFGIGD