Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrad2831_3149 |
Symbol | |
ID | 6139196 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium radiotolerans JCM 2831 |
Kingdom | Bacteria |
Replicon accession | NC_010505 |
Strand | - |
Start bp | 3329180 |
End bp | 3330358 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641628860 |
Product | succinyl-diaminopimelate desuccinylase |
Protein accession | YP_001755814 |
Protein GI | 170749554 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
TIGRFAM ID | [TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.53519 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGCTG ACCATCACGC CCCCGACGCG GCCCTGCGCC TCGCGCAGGA CCTGATCCGC TGTCCGTCCG TGACACCGGA AGATCGGGGC GCCCTCGACG TGGTCGCCGA CGCGCTCCGG CCGGCCGGCT TCGCGATCGA GCGGCCGGTC TTCGCGGAGC CCGGCTATCC CGATACGCCG AACCTCTACG CCCGCATCGG GCAGAACGGT CCGTGCCTCG TCTTTGCCGG CCACACCGAC GTCGTGCCGG AGGGCGAGGG CGCCTGGCGC CACGATCCCT TCGCGGGCGC CGTGGCCGAC GGGATGCTGT ACGGCCGGGG CGCGGCCGAC ATGAAGGGCG GCGTCGCCTG CATGCTCGCG GCGACCCTCG CCTTCCTCGA CCGGCGCGGG GCCGATTTCG GCGGCTCCAT CGCGTTTCTG ATCACCGGCG ACGAGGAGGG ACCCGCGGTC AACGGCACCG TGAAGCTCCT CGACTGGGCG CGGCGCCGCG GCGAGCGATT CGACCATTGC GTGCTCGGGG AGCCGACCAA CCCGGGCCGG CTCGGCGAGA TGATCAAGAT CGGCCGGCGC GGGTCGCTGA CCGGCAAGCT CACCGTGCTC GGGCGGCAGG GCCACGTCGC CTACCCGCAC AAGGCCGAAA ACCCGATTCC CGGCCTGCTG CGCCTCGCCT CGGCGCTGAT CGCCGAGCCT CTGGATCGTG GGACCGCGCA TTTCGACGCC TCGAACCTCG AATTCACCAC GGTCGACGTC GGCAATCCAG CCACCAACGT GATCCCGTCG ACCGCCCGGG CAACCTTCAA CGTCCGCTTC AACGACGACT GGACGGCCGA GAGCCTGGGC GCCGAGATCC GCCGGCGCCT GGAGCAGGCG GCCGGGAACG CGGTCCGCTT CACCCTCGAC CTCCAGCCCT CGAACGCGCC GGCCTTCCTG ACGCGGCCGG ACGCCTTCGT GACGCTCGTC GCCGAGGCGA TCCGGGCCGA GACCGGTCTG ACGCCGACGC TCTCCACCAC CGGCGGCACG TCGGACGCGC GCTTCATCAA GGATGCCTGC CCGGTGATCG AGTTCGGCCT CGTCGGCGAG ACGATGCACC AGGTCGACGA ATGCGTGGCG GTCGCCGACC TCGAGCGGCT GACCGCGATC TACGGGCGCG TGCTCGACGC CTATTTCCCG GGATCGTAG
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Protein sequence | MPADHHAPDA ALRLAQDLIR CPSVTPEDRG ALDVVADALR PAGFAIERPV FAEPGYPDTP NLYARIGQNG PCLVFAGHTD VVPEGEGAWR HDPFAGAVAD GMLYGRGAAD MKGGVACMLA ATLAFLDRRG ADFGGSIAFL ITGDEEGPAV NGTVKLLDWA RRRGERFDHC VLGEPTNPGR LGEMIKIGRR GSLTGKLTVL GRQGHVAYPH KAENPIPGLL RLASALIAEP LDRGTAHFDA SNLEFTTVDV GNPATNVIPS TARATFNVRF NDDWTAESLG AEIRRRLEQA AGNAVRFTLD LQPSNAPAFL TRPDAFVTLV AEAIRAETGL TPTLSTTGGT SDARFIKDAC PVIEFGLVGE TMHQVDECVA VADLERLTAI YGRVLDAYFP GS
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