| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_3048 |
|---|
| Symbol | |
|---|
| ID | 6139093 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | + |
|---|
| Start bp | 3215325 |
|---|
| End bp | 3218330 |
|---|
| Gene Length | 3006 bp |
|---|
| Protein Length | 1001 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641628758 |
|---|
| Product | signal transduction histidine kinase |
|---|
| Protein accession | YP_001755713 |
|---|
| Protein GI | 170749453 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3920] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.143163 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCTCT CCCGCATACG CGAGGACGAA GCGGCGCGCC TGCGCGCCCT CGACCGTTAC
TGCCTGGTCG ACACGCCGCG TGAGCAGGAT TTCGACGAGA TTGCCGAGGC GGCCGCCGAG
CTGTGCGGGA CTCCCATCGC GGTGGTCAAC CTGGTCGGGG ACGGGCGGCA ATTCTTCAAG
GCCGAAGTCG GACTGGGCAT ACGGCAGACG CCAATCGAAA CTTCGTTCTG TCGCCAAGCT
ATCCTGCAGC AGGATTTCCT CCACGTACCC GACGCGACGC GGGACCCGCG CTTCCAGGGC
AATCCGCTCG TCACGGGGGA GCCGGGGCTG CGCTTCTACG CCGGGGCGCT GCTGAAGACC
GCCGACGGTC ATCCAATTGG CACCGTCTGC GTCCTCGACA CCAAGCCCCA TCAGCTCAGC
GACCGGCAGC GCGCGGGCCT GCTCCGGCTC GCCCGCCAGA CGATGGCGCA GATGGAGCTG
CGCCGCTCCC TGCGCGAGCA GGCCGAGCAG CGCCTGCTGC ACGCGCGCAT CCTCGACAGC
GCCACCGACT ATGCCATCGT GGCGATGGAT CCCGAGGGAC GCGTCACTCG CTGGAACGCC
GGTGCCGAGC GCATCCTGGG CTGGTCGGAA GCCGAGATGC TGGGTGGCAC GATCGGGGTG
ATCTTCACCC ACGAGGATCG CGCCGCCGAG CGGCCGACGC GTGAGATGAG GCAATCCCTC
GAGTCGGGCA GCGCGCCGGA CGAGCGCTGG CATCTGCGCA AGGACGGCAG CCGCTTCTGG
GCCAGCGGCG AGATAATGCC GCTGAGATCC GAGGACGGCG CCCTCGTGGG GTTCGTCAAG
ATCCTGCGTG ACCGCACCGA GCAGCGCGCG GCCGACGCCG CCTTGGAGGC CAGCGAGCTG
CGCTACCGCT CGCTCGTCGA GGTCAGCCCG CAGATCGTCT GGTTCGCCGA CGCGGAGGGC
AGCGTCACCT ACTGCAACGC CTACTGGTAC GATTACACGG GCCTACCCGC CGGCGCGACC
AGCGAGCAGA GCTGGATGAG CGTCATCCAT CCCGATCACC GGGAGGCGAC GCGTGCGGCG
TGGCTCGCGG CGGCCGGCGC GGGGCGTCTC TACGAGGTGG AGTTCCCCCT GCGGCGCGCG
GACGGGCAGT ACCGCTGGTT CCTCTCCCGC GCCCACCCCG TCCGCGACGG GGACGGCGAG
CGGCGCAGCT GGATCGGCAC GACCATCGAT ATCCACGAGC GCAAGTTGGC CGAGGAGCGC
TTCCAGGTCC TGACCGAGCT GGCCCCGGCG ATAATCTGGT TCGGCAATCC GGACGGCAGC
CTCAACTACC TCAACGACCG GTGGTACGCC TACACCGGCC AGACGCCCGA GCAGGCGCTG
CCGATGGGCT GGGACCGGCC GGTCCATCCG GACGACCTCC CGGGCCTGCT GCAGGCGTGG
GAGACGGCGC GGAGCCGGGA GGTCATGTAC GACACCGAGG CCCGCCTGCG CCGCCACGAC
GGCACCTACC GCTGGTTCCT CATTCGGGCC GAGCCCCTGA AGGACGCGAG CGGCGCGGTC
GTGGGCTGGC TCGGCAGCAA CAGTGACATC CATGACCGGC GCCGCGCCGA ACTGGAGTTG
CGTGAGGCCA GGGAGCAGCT GGCCTTGGCC GTCGAGGCGA CCGCCACCGG GATCTTCGAC
TACGATCTCG TCGCCGACGT GTTGACCTGG GACGCGCGCA CCCGCGCCCT GTTCGGCCTG
CCGCCCGACG CGCCCGTGAG CTACGACGTC TTCCTGGCCG GGCTTCACCC GGATGACCGC
GCCTGGGTCG ACGCGGCGGT CCAGCGCGCC ATCGACCCGA CCGGTCCCGG CACCTACGAC
ATCGCCTTTC GCGTTGTCGG ATTGCAGGAC GGGGTCGAGC GCTGGGTCGC CGCGAAGGGT
CAAGCCTTCG CGGCGGACGG GCGGACGGTG CGATTCATCG GCACCACGCG CGACGTCACC
GCGAGCCGGC GCGCCGAGAA TGCGACCCGC GAGGCGGAGG AGCGCTATCG GCTCGCGGCC
CGTGCGACCA ACGACGCGAT CTGGGACTGG GATCTGGCGA GCGACCACAT CCTCTGGAAC
GAGGCCGTGC AGACCCTGTT CGGCTACGCG GCCGACGCGG TGGGCGCGAG CGGGTCGTGG
TGGAAGGCGC AGATCCACCC CGAAGACCGG GCGCGCGTGA CGGCCGGCAT CTACGCCGTG
ATCGACGACA GCATCGAGCA CTGGTCCGAG GAGTACCGCT TCCGGAAAGC GGATGGCGAC
TACGCCTACG TCCTCGACCG CGGCTACGTG CTGCGCGACG CGGCCGGGCA GGCCGTGCGG
ATGATCGGTG CCATGCTCGA CATCACTGAG CGCAAGCGCG CCGAGGAGCA TCAGCGCCTT
CTCACCGGTG AGTTGCAGCA CCGGGTCAAG AACACGCTGG CGATGGTCCA GGCCATCGCC
AACCAGACGT TCCGCAACGC CGCCGACCTG GACGCGGCCC GGGACGCCTT CTCGGCGCGC
CTGATCCTGC TGGGCCGCGC GCACGACATC CTGACCCGGG CGAGCTGGAC CGAGGCACCC
ATCGCCGACG TGGTGGACGG CGCTCTCGCG GTGCATCAGG GCGGCGCCGG GACGCGCATC
CGCGTGAGCG GGCCCGGCGT GCTCCTCGCC GCCAAGCCGG CGCTCGCCCT GGCGCTGGCG
CTGCACGAAC TCGCCACCAA CGCGGCCAAG TACGGGGCGC TCTCGACCGC GGAGGGCGGC
GTCGATCTCC GCTGGCACGT GGTACGCGAG GCCGCCGAGC CGCGCTTCTG CCTGACATGG
TCGGAGACGG GTGGACCGCC GATCCTCGCG CCCCCCGTGC GGCGCGGCTT CGGCTCGCGG
CTGATCGAGC GCAGCTTCTC CGTCGAAGTC GGCTGCGAGG TCAGGCTCAC CTTCGCCCCG
ACCGGCCTGA TCTGCCGGCT CGAAGCCCCC CTCGCCGCGA TGCAGGAAGC GCCGAGCGCC
GCTTGA
|
|---|
| Protein sequence | MDLSRIREDE AARLRALDRY CLVDTPREQD FDEIAEAAAE LCGTPIAVVN LVGDGRQFFK
AEVGLGIRQT PIETSFCRQA ILQQDFLHVP DATRDPRFQG NPLVTGEPGL RFYAGALLKT
ADGHPIGTVC VLDTKPHQLS DRQRAGLLRL ARQTMAQMEL RRSLREQAEQ RLLHARILDS
ATDYAIVAMD PEGRVTRWNA GAERILGWSE AEMLGGTIGV IFTHEDRAAE RPTREMRQSL
ESGSAPDERW HLRKDGSRFW ASGEIMPLRS EDGALVGFVK ILRDRTEQRA ADAALEASEL
RYRSLVEVSP QIVWFADAEG SVTYCNAYWY DYTGLPAGAT SEQSWMSVIH PDHREATRAA
WLAAAGAGRL YEVEFPLRRA DGQYRWFLSR AHPVRDGDGE RRSWIGTTID IHERKLAEER
FQVLTELAPA IIWFGNPDGS LNYLNDRWYA YTGQTPEQAL PMGWDRPVHP DDLPGLLQAW
ETARSREVMY DTEARLRRHD GTYRWFLIRA EPLKDASGAV VGWLGSNSDI HDRRRAELEL
REAREQLALA VEATATGIFD YDLVADVLTW DARTRALFGL PPDAPVSYDV FLAGLHPDDR
AWVDAAVQRA IDPTGPGTYD IAFRVVGLQD GVERWVAAKG QAFAADGRTV RFIGTTRDVT
ASRRAENATR EAEERYRLAA RATNDAIWDW DLASDHILWN EAVQTLFGYA ADAVGASGSW
WKAQIHPEDR ARVTAGIYAV IDDSIEHWSE EYRFRKADGD YAYVLDRGYV LRDAAGQAVR
MIGAMLDITE RKRAEEHQRL LTGELQHRVK NTLAMVQAIA NQTFRNAADL DAARDAFSAR
LILLGRAHDI LTRASWTEAP IADVVDGALA VHQGGAGTRI RVSGPGVLLA AKPALALALA
LHELATNAAK YGALSTAEGG VDLRWHVVRE AAEPRFCLTW SETGGPPILA PPVRRGFGSR
LIERSFSVEV GCEVRLTFAP TGLICRLEAP LAAMQEAPSA A
|
|---|
| |