| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_3015 |
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| Symbol | |
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| ID | 6139060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methylobacterium radiotolerans JCM 2831 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010505 |
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| Strand | - |
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| Start bp | 3171388 |
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| End bp | 3173721 |
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| Gene Length | 2334 bp |
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| Protein Length | 777 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641628727 |
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| Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_001755682 |
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| Protein GI | 170749422 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.392311 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGATTT CTTTCCTGAT CGATACCGAT CGCAAGGCGG ATCCACTCGA CGCGAACCTT
CGCGCGCGCG CCCGCGTCGA GCAGCTGGAC GTCGCGCTGC GCTTGGTACC CTTCACGATT
CTTGTGAGTC TCAGCGTCGT ACAGGTCATC GTCTACCTGT TCTGGAACCC GGCCAATCGC
GCCTATCTCG CCGGTCTCGA AACGCTCATC CTGCCGCTGG CGGTGGTCTC GCTCCAGCAG
TGCTGGCGCT GGCGCTCCCG TCCCAAGCCG CTCCAGGTGC CGTCGTCGTT CGTGCAGGGC
GTCGTGCTGG CCGCGCAGGC CTACGGGTTT CTCCTGGCCT CCATCCCGGT CATGCTCTTC
TCCGGCGCCG ACGCGCACGG GCGGCTGCTG ATCGCCTCCA GCATCGCGGG CCTGATCGCG
ACCGGCATGA GCGCGGCGGT GCTGCCGCGG GTCGCCATCG GCTATTCCGG CCTGATCATC
CTCGGCTCGT TCATCGCCCT CGCGACGACC GGGGAGGCCT TCTACATCTA CGTCGCGGTC
CTGCTGTTCT TCTACGCGAT CTTCATCTGC TTCACGATCC TGCATCTGAG CCGGCTCCTG
ACGATGCGGG TCATCGCGCA GATCGAGCTG GAACGGCAGC AGGAGTTCAC CCACCTCCTG
CTCAACGAGT TCGAGGAGAG CGCCAGCGAC TGGCTCTGGG AGACCGATGC CGACCTGCGC
CTCCAGCACG TCTCGCCGCG CCTGATCGAG GTCGCCGGCT CCTCCGAGCG CCAGCTGATG
GGCCTGCCGC TGGAGCGGCT GCTGCTGCCG CCGGTGGCGC CGCCCAGGAG CCACTCGAGC
ACCACCCTCT GGAGCTGCAT CGCCGAGCGG CGGGCCTTCC GGAACCTGCA CCTGCAGCTC
GATATCGCCG GCGAGCGGCG GACTTGGTGC CTCAGCGGGA AGCCGACCTT CGACCGGGCC
GGCGCCTTCT CGGGTTACCG CGGCGTCGGC TCGGACGTGA CGGAGAAGCG GCGCTCCGAG
GAGCGCCTGT CCTATCTCGC TCTGCACGAT TCCCTGACGG ATCTGCCCAA CCGGGTCCTG
TTCCACCAGC TCCAGGAAGC GGCGCGGGAA CGGCTCGCGC AGGGCGATCG GTTCGCCGTG
CTGGCCCTCG ACCTCGACGA GTTCAAGAGC GTCAACGACA CGTTCGGCCA CGCGGCCGGC
GACAAGCTCC TGAAGTCGGT CGCCGAGCGG CTCCGGAGCT TCGAGGCCTC CGATGTCCAG
CTCGCCCGCC TCGCGGGCGA CGAGTTCGCG GTCCTCGCCA CCGGCCGGAG CGCCCGGGAC
CTGCACGCGA TCGAGGCGCT CGCCAACGGC ATCGTGGAGG CGCTCGCGTC GCCGTTCACC
ATCGACGGCA TCCGGCTGAC CGTCAGCGTC AGCATCGGGA TCGCGATCGC TCCGCAGGAC
GGTTGCCAGG AGATCATGCG GCGCGCCGAT CTCGCGCTCT ACCGCATGAA GAGCGAGGGC
CGGAACGGCT ACCGCTTCTA CGAGGCCGAG ATGGACGAGC GGATCGAGGC CCGCCGCGCC
CTGACGGCCG ATCTGCGGGG CGCCCTCGAT CGGGACGAGT TCGTCCTCTA CTTCCAGCCG
ATCGTGGCGG CCAAGGAGTG CCGCGTGCGC GGCTTCGAGG CGCTGATCCG GTGGAAGCAC
CCGGTGCGCG GCTTCGTCTC GCCCGGCGAG TTCATCCCCC TCGCCGAGGA GACCGGGGTG
ATCATACCGC TGGGCGAGTG GATCCTGCGG GAGGCATGCC GGATCGCGGC CGGCTGGCCG
GGGGATGTCC GCATCGCCGT CAACCTGTCC CCGCGGCAGT TCCGGCACTC GGACCTGACC
CAGCTCGTCC GGTCCGCCCT GCGCACGAGC GGGCTGGCCG CCGCGCGCCT GGAGCTCGAG
GTGACCGAGT CGGTGTTCCT GGAGGCCACG CCGGCGATCA ACGCCACGCT CTCGAAACTG
CGCGAGATGG GCGTGCGGCT GTCGCTCGAC GATTTCGGAA CCGGCTATTC GAGCTTGAGC
TACCTGCGCC GGATCGCCTT CGACAAGATC AAGATCGACC AGAGCTTCGT CCGGGACCTG
CCGCAGGAGC GCGGCGCGGC GGCGATCGTG AGCGCGATCA TCGACATGGC GACGAGTCTC
GACATGACCA TCACCGCCGA GGGCGTGGAG ACGGACGCGC AGCGCGCCTG CCTGCTGGAG
CAGGGCTGCC ACGAATTCCA GGGCTACCTG TTCAGCAAGC CGCTGCCGGC CGAGCAGGCC
GCGGCGCTGG CGCGCAGCCG TCAGCTCCTC CCGGCGGCGG TCCGGGCGGC GTGA
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| Protein sequence | MLISFLIDTD RKADPLDANL RARARVEQLD VALRLVPFTI LVSLSVVQVI VYLFWNPANR
AYLAGLETLI LPLAVVSLQQ CWRWRSRPKP LQVPSSFVQG VVLAAQAYGF LLASIPVMLF
SGADAHGRLL IASSIAGLIA TGMSAAVLPR VAIGYSGLII LGSFIALATT GEAFYIYVAV
LLFFYAIFIC FTILHLSRLL TMRVIAQIEL ERQQEFTHLL LNEFEESASD WLWETDADLR
LQHVSPRLIE VAGSSERQLM GLPLERLLLP PVAPPRSHSS TTLWSCIAER RAFRNLHLQL
DIAGERRTWC LSGKPTFDRA GAFSGYRGVG SDVTEKRRSE ERLSYLALHD SLTDLPNRVL
FHQLQEAARE RLAQGDRFAV LALDLDEFKS VNDTFGHAAG DKLLKSVAER LRSFEASDVQ
LARLAGDEFA VLATGRSARD LHAIEALANG IVEALASPFT IDGIRLTVSV SIGIAIAPQD
GCQEIMRRAD LALYRMKSEG RNGYRFYEAE MDERIEARRA LTADLRGALD RDEFVLYFQP
IVAAKECRVR GFEALIRWKH PVRGFVSPGE FIPLAEETGV IIPLGEWILR EACRIAAGWP
GDVRIAVNLS PRQFRHSDLT QLVRSALRTS GLAAARLELE VTESVFLEAT PAINATLSKL
REMGVRLSLD DFGTGYSSLS YLRRIAFDKI KIDQSFVRDL PQERGAAAIV SAIIDMATSL
DMTITAEGVE TDAQRACLLE QGCHEFQGYL FSKPLPAEQA AALARSRQLL PAAVRAA
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