| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_2991 |
|---|
| Symbol | |
|---|
| ID | 6139036 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | + |
|---|
| Start bp | 3146501 |
|---|
| End bp | 3148819 |
|---|
| Gene Length | 2319 bp |
|---|
| Protein Length | 772 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641628703 |
|---|
| Product | RNA-binding S1 domain-containing protein |
|---|
| Protein accession | YP_001755658 |
|---|
| Protein GI | 170749398 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2183] Transcriptional accessory protein |
|---|
| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.940851 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGCCG TGAACGCTCT GATCGCCGAG GAGCTCGGTG TCGGGGAGGC GCAGGTTGCC
GCCACCGTCG CGCTCCTCGA TGGCGGCTCG ACCGTGCCGT TCATCGCGCG CTACCGGAAG
GAGAATACTG GCGGCCTCGA CGACACGCAG CTGCGCAGGC TGGAGGAGCG GCTGTCCTAC
CTGCGCGATC TCAACGAGCG GCGCGCCGCG ATCGTCGCGA GCATCACGGC GCAGGGCAAG
ATGTCCCCAT CCCTGGCGGC GGCCCTCGAC GCCGCCGACA CCAAGGCGCG GCTGGAAGAC
CTGTACCTGC CCTTCCGGCC CAAGCGGCGC TCGAAGGCGC AATCCGCCCG CGAAGCCGGC
CTCGAACCGC TCGCCCAGAC CCTGCTGAGC CGGCCCGACC GCGCGCCCGC GTCGGTCGCG
GCCGATTACG TGTCGGACGC GCGCGGCGTG CCGGACGTCG AGGCCGCGCT CGACGGCGCC
CGCGCCATCC TGATCGAACG CTTCGCTGAG GACGCCGACC TCGTGGGACG ATTGCGGGCG
GATTACTGGC GGTCCGGGCA GCTTGTCTCG CGGGTGCGCA AGGGCAAGGC GAGCGAGGGG
GCGAAGTTCT CGGACTACTT CGACTGGAGC GAGCGGCTGG AGCGGATGCC CTCGCACCGG
ATCCTGGCAA TCTTTCGCGG TGAGCGGGAA GAGGTGCTCG ACGTCGGCTT CGACGCGGAG
GGCGAGGATT CGCCGCCGGG TCTACCCGGG CCGTTCGAGA CGGCGATCTG CCGCCGCTTC
GAGATCGCGT CGCGGGGGCG CCCCGGCGAT GCCTGGCTCC TCGACACGGT CCGCACGGCG
TGGCGGATGA AGATCCGGAC CGGAATCAAG CAGGACCTGC GCGGCCGTCT GTTCGAGCGG
GCCGAGGACG AGGCCGTGAC AGTCTTCGCC GGGAACCTGA AGGACCTGCT GCTCGCTGCC
CCGGCGGGCG GGCGGGCGAC GATGGGGCTC GATCCGGGCT ACCGGAACGG CGTGAAGGTC
GCCGTGGCGG ATCGAACCGG GCGGGTCGTC GCGGTGGAGA CGACCTACCC GCACGAGCCG
CAACGGCGCT GGCGCGAGGC CGTCGCGACG CTCGGCCGGC TGTGCCGGCT GCACGGCGTG
GAGCTTCTCG CCGTCGGCAA CGGCACCGCT TCCCGCGAGA CCGAGCGCCT CGCCGCGGAG
ATCATCGCAG CCAACCCGGA CCTGCCGCTC GCGAAGGTGA TGGTCTCCGA GGCCGGCGCC
TCGGTCTACT CGGCCTCTGA GATCGCCGCC AAGGAATTGC CCGACCTCGA CGTGTCCCAT
CGCGGCGCGG CGTCGATCGC CCGCCGTCTC CAGGATCCCC TGGCGGAACT GGTCAAGATC
GACCCCAAGT CGATCGGCGT CGGGCAGTAC CAGCACGACG TGAGCGAGGC GAAGCTGTCG
CGGTCGCTCG CGGCGGTGGT GGAGGACGCG GTCAACGCCG TGGGGGTGGA CGTCAACACG
GCCTCCCCGG CCCTCCTCGC GCAGGTCTCG GGTCTCGGCG GCGCGATGGC GGCGCGGATC
GTCGCCCATC GCGACGCCCA GGGCCCGTTC CGGACGCGCG CGGCGCTCAA GAAGGTCCCG
GGGCTCGGCC CGAAGACTTT CGAGCTGGCC GCGGGCTTCC TCCGCATCCA GGGCGGCGAC
GACCCGCTCG ACGGGTCGGG AGTCCACCCG GAAGCCTATC CGGTGGTCCG CCGCATCCTC
CAGGCGACGA AGAGCGACAT CCACGTCCTG CTCGGCAACG CCGCCCTGCT CGGCCGCCTC
GTGCCGGAGC CGTTCGTCGA CGCGCGCTTC GGCCTGCCGA CCGTGCGCGA CATCATCGCC
GAGCTCGAGA AGCCGGGGCG GGACCCGCGG CCGGAGTTCA AGACGGCGCG CTTCCAAGAA
GGCGTCGAGA CGATCGGCGA CCTCAAGCCC GGCATGCAGC TGGAGGGTGT CGTCACCAAC
GTCGCCGCCT TCGGGGCTTT CGTGGATATC GGCGTCCATC AGGACGGCCT CGTCCACATC
TCGGCGATGG CCCGGCGACG GATCGCCTCG CCCACCGAGG TGGTCCGGAT CGGTGAGGTC
GTCCGGGTGC TGGTCCTCAA CGTCGACGTC CCGCGCAAGC GCATCGCGCT GTCGATGCGG
CTCGACGATC CCGTCGAGCC GGGCCAGCCG GCGCGGCGGA CGGGCGAGCC GAAGCAGGAC
GCGCCGCGGA GCCGACCGAG CCCGGTGCCG GATCCCGCTC CGGGCGGGGC GCTGGCCGAG
GCGCTCCGGC GCGCGGGCGC GGCGCCGCGG CGCGACTGA
|
|---|
| Protein sequence | MKAVNALIAE ELGVGEAQVA ATVALLDGGS TVPFIARYRK ENTGGLDDTQ LRRLEERLSY
LRDLNERRAA IVASITAQGK MSPSLAAALD AADTKARLED LYLPFRPKRR SKAQSAREAG
LEPLAQTLLS RPDRAPASVA ADYVSDARGV PDVEAALDGA RAILIERFAE DADLVGRLRA
DYWRSGQLVS RVRKGKASEG AKFSDYFDWS ERLERMPSHR ILAIFRGERE EVLDVGFDAE
GEDSPPGLPG PFETAICRRF EIASRGRPGD AWLLDTVRTA WRMKIRTGIK QDLRGRLFER
AEDEAVTVFA GNLKDLLLAA PAGGRATMGL DPGYRNGVKV AVADRTGRVV AVETTYPHEP
QRRWREAVAT LGRLCRLHGV ELLAVGNGTA SRETERLAAE IIAANPDLPL AKVMVSEAGA
SVYSASEIAA KELPDLDVSH RGAASIARRL QDPLAELVKI DPKSIGVGQY QHDVSEAKLS
RSLAAVVEDA VNAVGVDVNT ASPALLAQVS GLGGAMAARI VAHRDAQGPF RTRAALKKVP
GLGPKTFELA AGFLRIQGGD DPLDGSGVHP EAYPVVRRIL QATKSDIHVL LGNAALLGRL
VPEPFVDARF GLPTVRDIIA ELEKPGRDPR PEFKTARFQE GVETIGDLKP GMQLEGVVTN
VAAFGAFVDI GVHQDGLVHI SAMARRRIAS PTEVVRIGEV VRVLVLNVDV PRKRIALSMR
LDDPVEPGQP ARRTGEPKQD APRSRPSPVP DPAPGGALAE ALRRAGAAPR RD
|
|---|
| |