| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_2855 |
|---|
| Symbol | |
|---|
| ID | 6138899 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | - |
|---|
| Start bp | 3005700 |
|---|
| End bp | 3008864 |
|---|
| Gene Length | 3165 bp |
|---|
| Protein Length | 1054 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641628566 |
|---|
| Product | acriflavin resistance protein |
|---|
| Protein accession | YP_001755522 |
|---|
| Protein GI | 170749262 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0841] Cation/multidrug efflux pump |
|---|
| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.427735 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGGCG GCATCTCGGC CCCGTTCATC CGGTTTCCGG TGGCAACCAC GCTGATCATG
GTCGGCATCC TGTTCCTCGG GGTGGTGGCC TACCCGCTGC TCGGCGTCGC GCCGCTGCCG
CAGGTGGATT TCCCGACGAT CCAGGTGACC GCGCAGCTGC CGGGGGCCAG CCCGGAGACG
ATGGCCTCGT CGGTGGCGCA GCCCCTGGAG CGGCAGTTCT CCCAGATCCC GGGCGTGTCG
CAGATGACCT CGACGAGCTC CCTCGGGATC TCGACGGTCA CGGTCCAGTT CGACCTCAAC
CGCAACATCG ACGGCGCGGC GAGCGACATC CAGGCGGCGA TCAACGCCGC CAGCGGCCAG
CTCCCGAAGA ACCTCCCGAC CCCGCCGACC TACCGCAAGG TCAACCCGGC CGATTCGCCG
ATCCTGCTGC TCTCGGCCAC CTCCGACAGC ATGCCGCTGA TCGACGTCGA CGACGCGGTC
GACGTCCAGC TCGCCCAGCG GATCAGCCAG ATCTCGGGCG TCGCCCAGGT CTTCATCGGC
GGCCAGCAGA AGCCCGCCGT GCGGATCCAG ATCGATCCGG CGAAGCTCGT GGCCAAGGGC
CTGTCGCTGG AGGACGTGCG CGCGCAGCTC ACCCTCACCA CGGTCAACAA CCCGAAGGGC
AGCATCGACG GCGGCAGCCA CAGCTACACC ATCTACGCCA ACGACCAGCT CACCGCGGCC
CACAACTGGA ACGACGTCAT CGTCGCCTAT CGCGACGGCG CGCCGCTGCG CGTCCGCGAC
ATCGGACAGG CGGTCGCCGG TCCCGAGGAC ACCAAGCAGG CCGGCTGGAC CAACGGCAAG
CGCGGCATCT TCCTGGTCGT GTTCAAGCAG CCCGGCGCCA ACGTCATCGA CACGGTCGAC
AGCATCAAGG CGCAGCTGCC CCGCCTGACC GCCACATTGC CGGCCGCCAT CAAGGTCGGC
ATCCTGAGCG ACCGCACCCA GACCATCCGC GCCTCGGTCG AGGACGTGCA GTTCACCCTG
CTGCTGACCA TCGTGCTGGT CGTCGGGGTG ATCTTCGTCT TCCTGCGCAG CTTCTGGGCG
ACCGTGATCC CGAGCGTGAC TGTGCCGCTC GCGCTGCTCG GCGCCTGCGC GCTGATGTGG
ATGGCGGGCT ACACCCTCGA CAACCTCTCG CTGATGGCCC TGACCATCTC GGTGGGCTTC
GTGGTCGACG ACGCCATCGT CGTGCTGGAG AACATCAGCC GCTACGTCGA GGAGGGGATG
CGGCCCATGG AGGCCGCGTT CAAGGGCGCG GGCGAGATCG GCTTCACCAT CGTGTCGATC
TCGGTGTCGC TGATCGCCGT GCTGATCCCG CTCCTGCTGA TGGGGGGCAT CATCGGCCGG
CTGTTCCGCG AGTTCGCCGT GGTGCTGTCG ATGACCATCG CGGTCTCGGC CTTCGTGTCC
CTGACTCTGA CCCCGATGAT GGCCTCGCGG TTGCTGAAGG CCCACGATGC CGAGCGTCAC
GGCCGCCTCT ACCGGATGAG CGAGGCCGCC TTCGACTGGC TGCTCGCGGT CTACGCCGAC
GCCCTCGACG TCGCCCTGCG CTTCCGCCGC GTCACGCTGC TGGTCTTCTT CGCCACCCTG
GCGCTGACCG GCTACCTGTT CGTGGCGATC CCGAAGGGCT TCTTCCCGCA GCAGGACACC
GGTTTCATGA TCGGCGTCAC CGAGGCGGGC CAGGACATCT CCTTCTCGGC GATGAAGGCG
CTGCAGGAGA AGGTCGGCGC GATCGTCCAG GCCGATCCGG CGGTGGCCAC GGTCGGCATG
TCGCTCGGCG GCAACGGCCA GGCGCTCAAT TCCGGGCGCA TGTACATCAC GCTCAAGCCG
CGCGAGGAGC GCGACGTCAA CGCCTTCCAG GTGATCGGCC GTCTGCGCCC GAAGCTGGAG
CGCGTCGAGG GCATCCGGAC CTTCATCCAG GCGACGCAGG ACGTGCGCAC CGGCGGCCGC
ACCTCGCGGA CGCAGTTCGA GTACACCCTC CAGGACCCGG ACCTCGCCGA GCTGAACACC
TGGGCGCCGC GCATCCTCGA CAAGATGAAG ACGCTGCCGG AGCTGCGCGA CGTCGCCACC
GACCAGCAGA CCCGGGGCAC GACGCTGACG CTGTCGATCG ACCGCGACGC CGCCTCGCGC
TACGGCATCA CGCCCCAGCT GATCGATGAC ACGCTCTACG ACGCGTTCGG CCAGCGCCAG
ATCGCGCAGT ACTTCACGCA GCTGAACAGC TACCACGTGG TGCTGGAGGT GCTGCCGGCG
CTCCAGGGCA GCGTCGAGAG CCTGGACAAG ATCTACATCA AGGCGCCGAT CGGCGGCGGG
CAGGTGCCGC TCGCGGCCTT CGCCCACTGG TCGACGGACC CGGTGGCGCC CCTGGCGGTG
AACCACCAGG GCCAGTTCCC GGCGGTGACG ATCAGCTTCA ACCTCGCCCC CGACGTCGCC
CTGGGGCAGG CCACGGAGGC GATCGGCCGG GCGATGCGGG AGCTGCAGGT GCCGCCGACC
GTGGTGAGCG GCTTCCAGGG CACCGCCCAG GCCTTCCAGC AGTCGCTCTC GACGGTGCCG
CTGCTGATCC TGGCGGCCCT GTTCGTCGTC TACCTGATCC TCGGCATCCT CTACGAGAGC
TTCATCCACC CGCTCACGAT CCTCTCGACC CTGCCGTCGG CCGGCGTCGG CGCCCTGGCG
GTGCTGATGT GGGCGGGGTT CGATTTCAGC CTGATCGCGC TCATCGGCAT CATCCTCCTG
ATCGGCATCG TGAAGAAGAA CGGCATCATG CTGGTCGACT TCGCGATCGT GGCCGAGCGC
GAGGAGGGTC TCTCGCCCGA GGTCGCGATC CGGAAGGCGG CGCTGCTGCG CTTCCGGCCG
ATCCTGATGA CCACGATGGC GGCCCTGCTC GGCGGCATCC CGCTGATGGT CGCCACCGGG
ACCGGCTCGG AGATCCGGCA GCCGCTCGGC TACGCCATGG TGGGCGGCCT CGCGGTCAGC
CAGGTGCTGA CGCTGTTCAC CACGCCGGTG ATCTACATCT ACCTGGACCG GCTGGCGCAC
CGCTTCTCGT TCCGCGACAA GCCGCGGGCG GTGGACGCGG CGCTCGAGGA CCCCGAGCCG
GTGGAGGAGG TTCGTGGGCC GCCGGCGCTG CGCGCGGCGG AGTGA
|
|---|
| Protein sequence | MKGGISAPFI RFPVATTLIM VGILFLGVVA YPLLGVAPLP QVDFPTIQVT AQLPGASPET
MASSVAQPLE RQFSQIPGVS QMTSTSSLGI STVTVQFDLN RNIDGAASDI QAAINAASGQ
LPKNLPTPPT YRKVNPADSP ILLLSATSDS MPLIDVDDAV DVQLAQRISQ ISGVAQVFIG
GQQKPAVRIQ IDPAKLVAKG LSLEDVRAQL TLTTVNNPKG SIDGGSHSYT IYANDQLTAA
HNWNDVIVAY RDGAPLRVRD IGQAVAGPED TKQAGWTNGK RGIFLVVFKQ PGANVIDTVD
SIKAQLPRLT ATLPAAIKVG ILSDRTQTIR ASVEDVQFTL LLTIVLVVGV IFVFLRSFWA
TVIPSVTVPL ALLGACALMW MAGYTLDNLS LMALTISVGF VVDDAIVVLE NISRYVEEGM
RPMEAAFKGA GEIGFTIVSI SVSLIAVLIP LLLMGGIIGR LFREFAVVLS MTIAVSAFVS
LTLTPMMASR LLKAHDAERH GRLYRMSEAA FDWLLAVYAD ALDVALRFRR VTLLVFFATL
ALTGYLFVAI PKGFFPQQDT GFMIGVTEAG QDISFSAMKA LQEKVGAIVQ ADPAVATVGM
SLGGNGQALN SGRMYITLKP REERDVNAFQ VIGRLRPKLE RVEGIRTFIQ ATQDVRTGGR
TSRTQFEYTL QDPDLAELNT WAPRILDKMK TLPELRDVAT DQQTRGTTLT LSIDRDAASR
YGITPQLIDD TLYDAFGQRQ IAQYFTQLNS YHVVLEVLPA LQGSVESLDK IYIKAPIGGG
QVPLAAFAHW STDPVAPLAV NHQGQFPAVT ISFNLAPDVA LGQATEAIGR AMRELQVPPT
VVSGFQGTAQ AFQQSLSTVP LLILAALFVV YLILGILYES FIHPLTILST LPSAGVGALA
VLMWAGFDFS LIALIGIILL IGIVKKNGIM LVDFAIVAER EEGLSPEVAI RKAALLRFRP
ILMTTMAALL GGIPLMVATG TGSEIRQPLG YAMVGGLAVS QVLTLFTTPV IYIYLDRLAH
RFSFRDKPRA VDAALEDPEP VEEVRGPPAL RAAE
|
|---|
| |