Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrad2831_2693 |
Symbol | |
ID | 6138736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium radiotolerans JCM 2831 |
Kingdom | Bacteria |
Replicon accession | NC_010505 |
Strand | + |
Start bp | 2836432 |
End bp | 2839314 |
Gene Length | 2883 bp |
Protein Length | 960 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641628403 |
Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
Protein accession | YP_001755360 |
Protein GI | 170749100 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.0967779 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.228544 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAGACC CCGAGACGCC GACGGATTGC GGAGACCGAG CAGGGCGTTC TCGCGCGGCC GCGACGCTGA CGGGCCGCGT CACGACGATC CGCGCCGCGG TCGGCGTCGC ATTCCTCTGT GTCGCCCTCC TCCTGGGCGC GCTCGCGCTC TCGACCGGCT TGGCGATCTT GCAGGTGGGC GGGCTCGCCA CGCGGACCTA CGACGAGTCC CTGACGTCGA TCAGCTTCGC CCGCGCGGCG GCGGCCGACT TCGCCAAGAT GCGCACGACC CTCATCCGGC GGATGCAGGC CCGCGACGGT GCCGAGGTGG CGAAGCGGGA TTCGGAGATC ACCGATCTCT CGGCGGTTCT GGCCGAGGAT CTCGTCATCG CGGCCGAGCG TGCCCAGTCC GAGCGGGCTG CGCGGACGGC CCAGGCGGTC CAGGCCGGCG TGGCTTCCTG GGAGAGCCTG CGCCGCGAGC TCGACCCCGT TACGGTGCGG CCGGATCAGG CGGCGGCCCT CGAACGGCAG GCCGACGCCG TCGAGGGCCA GATCGATCTC CTGATCAACG TCATGGCCGG CGACGGCTTC ACCTTCAGGC AGGCGGCGCG GCAGCGGGTG GTGGGCGCGA TCCGATGGCA CGCCGCCGCG GTCGCCCTCG TGATCCTTGC CTGCGGGCTG ATCGCCTGGC TGCTCACCCG CCGCATCAGC GGATCGGTGA GCGCGGCGGC CGAGGCGGCC GAACGGATCG CGGGCGGTCA GCTCGACGAT CGGATCCCCA CCGGCGGTCG CGACGGACTG AGCAGGCTGC TGGATGCCGT CGCGGCGATG CGGTCGACCA TCCGGGCGCT GACGCTGCGC GAGGTCAGCC AGCGCCGGGT CGCCGAGGCG CTCGTGACGG ACGCGCTGCA GACGTCGCGG GAAGGCGTGG TGGTGGTCGA TGCCGACGGC CGGATCGCCC TGGCGAACGC GCAGGCCCTC CGCTTCTTCG TTGGGCTCGA TGCCGCCATC GAGGCCGGTC TGTCCCTGAC GCGGATTGCG GACCAGCCAC GGGACAAGCA CCGGGAGGTG CTGGACGATT GCTTCAGGGC CCTGGCCCGG GACGGAGACA TCCGATTGGC CGACGGCCGC TGGCTGCGGG TGAGCCGCAG CGCCACCCGG CAGGGCGGCT TCATCGCGGT GTGCAGCGAC ATCAGCGTCC TCAAGGAGCA GGAGCGCCGC CTCACCCAGA CCAACCTGCG CCTCGACGCG GCCCTCGACA CCATGTCCCA GGGGCTCTGC CTCTACGACG GGCAGAGCCG GCTGATGGTG GTCAACCGGC GCTACAGCGA GATCTACGGC CTGCCGCCCG GCGCGGTCGT GCCCGGCATG ACCGCGCTCG AGGTCCTGAG CGCCAGCCTC GCGGCCGGCA ACCACCCCGG CTGCGATCTC GAGGCCCTGC TGCGGCAGCA GCGGGACGCC TTCAGCAACG GCGCGTGGCA GACGCATTTC CAGGAACTGA GCAACGGTCG CATCGTCGCC ATCGACCGTC GCGAGGCCGC CGATGGCGGG TTCGTGGCCA CCTACGAGGA CGTCACCGAG CGCCGCCGGG CCGAGGCCCG CATCGCCTTC ATGGCGCATC ACGACATGCT GACCGGGCTG CCCAACCGGG TGGCGGTGGG TCAGCAGATC GACGTGGCCG TGGCCCAGGC CGGGCGCGAC CAGGGCTTCG CGGTCTTCGC CATCGACCTC GACGACTTCC GGCCGGTCAA CGAGACCCTC GGCCACGGCA TCGGCGACGA GCTGCTCGTC GCGGTCGCCA ACCGGCTCAC CGCCTGTGTG CGCGAGATCG ACTGCGTCGC CCGCCTGGGG GCCGACGAGT TCATCGTGGT CCAGCGCGGC GTCGACCGGC CCGAGGACGC CGCCATCCTC GCCCGGCGCA TCATCGAGGT CGTCGGCGCG CCCTACAGCC TCACGCACCA CACGATCAGC GTCGGGCTCA CCATCGGCAT CACCCTCGCC CCCAGCGACG GGTCGAACGC GGACAAGCTC CTGAAGAACG CCGAGGTCGC CCTCGATCGG GGCAAGACCG AGGCGCGCGG CGCCTTCCGC TTCTTCGAGC CGGCGATGGA TGCCCGCCTC ATCGCGCGGC GAATCATGGA GCGCGACCTG CGCGACGCCC TCGCCCGGGA GGCGTTCGAG GTCTACTACC AGCCGATCTA CAGCCTCGAG ACGGACCGGA TCTGCGGCTT CGAGGCGCTG CTGCGCTGGA ACCACCCGGT CCGCGGCTTC GTCTCGCCGG CCGAGTTCAT CCCGATCGCC GAGGAGCTCG GGCTGATCGT GCCGCTCGGC GAGTGGGTGC TGCGCCGCGC CTGCGAGGAG GCCGCCCGCT GGCCGGACGA GCTCAAGGTC GCGGTCAACG TCTCGGCGGT GCAGTTCACC TCGGCGAGCC TCGTCACCGC CGTGCGCGAG GCGCTGCGGC GCACCGGCCT GCCGGGCCGG CGCCTGGAGC TGGAGATCAC CGAGACGGTG CTGGTGGCCA ATCCCGGCGC CACGACGGCG ATCCTCCACA GCCTCCGCGC GCTGGGCGTG CGCGTGGCGA TGGACGATTT CGGGACCGGC TACTCGTCGC TCAGCTACCT GCGCTCGTTC CCCTTCGACA AGATCAAGAT CGACCAGTCC TTCGTGCGCG ACCTGTGCGT GAAGGACGGG ACCGACTTCA TCGTGCGGGC GGTGATCGGC CTCGGCGCCA GCCTCGGCAT GACGACGACC GCCGAGGGCG TCGAGACGGA GGCGCAGCTC GCGCACCTGC GCGCCGAGGG CTGCGACGAG GTCCAGGGCT ACCTGTTCAG CCGCCCCGTC CCCGTGTCGG AGGTCGCCTC GGTCATCCGC CGCTGGAACG GCGCGCTCCG GGCGATCGCC TGA
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Protein sequence | MRDPETPTDC GDRAGRSRAA ATLTGRVTTI RAAVGVAFLC VALLLGALAL STGLAILQVG GLATRTYDES LTSISFARAA AADFAKMRTT LIRRMQARDG AEVAKRDSEI TDLSAVLAED LVIAAERAQS ERAARTAQAV QAGVASWESL RRELDPVTVR PDQAAALERQ ADAVEGQIDL LINVMAGDGF TFRQAARQRV VGAIRWHAAA VALVILACGL IAWLLTRRIS GSVSAAAEAA ERIAGGQLDD RIPTGGRDGL SRLLDAVAAM RSTIRALTLR EVSQRRVAEA LVTDALQTSR EGVVVVDADG RIALANAQAL RFFVGLDAAI EAGLSLTRIA DQPRDKHREV LDDCFRALAR DGDIRLADGR WLRVSRSATR QGGFIAVCSD ISVLKEQERR LTQTNLRLDA ALDTMSQGLC LYDGQSRLMV VNRRYSEIYG LPPGAVVPGM TALEVLSASL AAGNHPGCDL EALLRQQRDA FSNGAWQTHF QELSNGRIVA IDRREAADGG FVATYEDVTE RRRAEARIAF MAHHDMLTGL PNRVAVGQQI DVAVAQAGRD QGFAVFAIDL DDFRPVNETL GHGIGDELLV AVANRLTACV REIDCVARLG ADEFIVVQRG VDRPEDAAIL ARRIIEVVGA PYSLTHHTIS VGLTIGITLA PSDGSNADKL LKNAEVALDR GKTEARGAFR FFEPAMDARL IARRIMERDL RDALAREAFE VYYQPIYSLE TDRICGFEAL LRWNHPVRGF VSPAEFIPIA EELGLIVPLG EWVLRRACEE AARWPDELKV AVNVSAVQFT SASLVTAVRE ALRRTGLPGR RLELEITETV LVANPGATTA ILHSLRALGV RVAMDDFGTG YSSLSYLRSF PFDKIKIDQS FVRDLCVKDG TDFIVRAVIG LGASLGMTTT AEGVETEAQL AHLRAEGCDE VQGYLFSRPV PVSEVASVIR RWNGALRAIA
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