Gene Mrad2831_2693 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_2693 
Symbol 
ID6138736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp2836432 
End bp2839314 
Gene Length2883 bp 
Protein Length960 aa 
Translation table11 
GC content72% 
IMG OID641628403 
Productdiguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) 
Protein accessionYP_001755360 
Protein GI170749100 
COG category[T] Signal transduction mechanisms 
COG ID[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain 
TIGRFAM ID[TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0967779 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.228544 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGACC CCGAGACGCC GACGGATTGC GGAGACCGAG CAGGGCGTTC TCGCGCGGCC 
GCGACGCTGA CGGGCCGCGT CACGACGATC CGCGCCGCGG TCGGCGTCGC ATTCCTCTGT
GTCGCCCTCC TCCTGGGCGC GCTCGCGCTC TCGACCGGCT TGGCGATCTT GCAGGTGGGC
GGGCTCGCCA CGCGGACCTA CGACGAGTCC CTGACGTCGA TCAGCTTCGC CCGCGCGGCG
GCGGCCGACT TCGCCAAGAT GCGCACGACC CTCATCCGGC GGATGCAGGC CCGCGACGGT
GCCGAGGTGG CGAAGCGGGA TTCGGAGATC ACCGATCTCT CGGCGGTTCT GGCCGAGGAT
CTCGTCATCG CGGCCGAGCG TGCCCAGTCC GAGCGGGCTG CGCGGACGGC CCAGGCGGTC
CAGGCCGGCG TGGCTTCCTG GGAGAGCCTG CGCCGCGAGC TCGACCCCGT TACGGTGCGG
CCGGATCAGG CGGCGGCCCT CGAACGGCAG GCCGACGCCG TCGAGGGCCA GATCGATCTC
CTGATCAACG TCATGGCCGG CGACGGCTTC ACCTTCAGGC AGGCGGCGCG GCAGCGGGTG
GTGGGCGCGA TCCGATGGCA CGCCGCCGCG GTCGCCCTCG TGATCCTTGC CTGCGGGCTG
ATCGCCTGGC TGCTCACCCG CCGCATCAGC GGATCGGTGA GCGCGGCGGC CGAGGCGGCC
GAACGGATCG CGGGCGGTCA GCTCGACGAT CGGATCCCCA CCGGCGGTCG CGACGGACTG
AGCAGGCTGC TGGATGCCGT CGCGGCGATG CGGTCGACCA TCCGGGCGCT GACGCTGCGC
GAGGTCAGCC AGCGCCGGGT CGCCGAGGCG CTCGTGACGG ACGCGCTGCA GACGTCGCGG
GAAGGCGTGG TGGTGGTCGA TGCCGACGGC CGGATCGCCC TGGCGAACGC GCAGGCCCTC
CGCTTCTTCG TTGGGCTCGA TGCCGCCATC GAGGCCGGTC TGTCCCTGAC GCGGATTGCG
GACCAGCCAC GGGACAAGCA CCGGGAGGTG CTGGACGATT GCTTCAGGGC CCTGGCCCGG
GACGGAGACA TCCGATTGGC CGACGGCCGC TGGCTGCGGG TGAGCCGCAG CGCCACCCGG
CAGGGCGGCT TCATCGCGGT GTGCAGCGAC ATCAGCGTCC TCAAGGAGCA GGAGCGCCGC
CTCACCCAGA CCAACCTGCG CCTCGACGCG GCCCTCGACA CCATGTCCCA GGGGCTCTGC
CTCTACGACG GGCAGAGCCG GCTGATGGTG GTCAACCGGC GCTACAGCGA GATCTACGGC
CTGCCGCCCG GCGCGGTCGT GCCCGGCATG ACCGCGCTCG AGGTCCTGAG CGCCAGCCTC
GCGGCCGGCA ACCACCCCGG CTGCGATCTC GAGGCCCTGC TGCGGCAGCA GCGGGACGCC
TTCAGCAACG GCGCGTGGCA GACGCATTTC CAGGAACTGA GCAACGGTCG CATCGTCGCC
ATCGACCGTC GCGAGGCCGC CGATGGCGGG TTCGTGGCCA CCTACGAGGA CGTCACCGAG
CGCCGCCGGG CCGAGGCCCG CATCGCCTTC ATGGCGCATC ACGACATGCT GACCGGGCTG
CCCAACCGGG TGGCGGTGGG TCAGCAGATC GACGTGGCCG TGGCCCAGGC CGGGCGCGAC
CAGGGCTTCG CGGTCTTCGC CATCGACCTC GACGACTTCC GGCCGGTCAA CGAGACCCTC
GGCCACGGCA TCGGCGACGA GCTGCTCGTC GCGGTCGCCA ACCGGCTCAC CGCCTGTGTG
CGCGAGATCG ACTGCGTCGC CCGCCTGGGG GCCGACGAGT TCATCGTGGT CCAGCGCGGC
GTCGACCGGC CCGAGGACGC CGCCATCCTC GCCCGGCGCA TCATCGAGGT CGTCGGCGCG
CCCTACAGCC TCACGCACCA CACGATCAGC GTCGGGCTCA CCATCGGCAT CACCCTCGCC
CCCAGCGACG GGTCGAACGC GGACAAGCTC CTGAAGAACG CCGAGGTCGC CCTCGATCGG
GGCAAGACCG AGGCGCGCGG CGCCTTCCGC TTCTTCGAGC CGGCGATGGA TGCCCGCCTC
ATCGCGCGGC GAATCATGGA GCGCGACCTG CGCGACGCCC TCGCCCGGGA GGCGTTCGAG
GTCTACTACC AGCCGATCTA CAGCCTCGAG ACGGACCGGA TCTGCGGCTT CGAGGCGCTG
CTGCGCTGGA ACCACCCGGT CCGCGGCTTC GTCTCGCCGG CCGAGTTCAT CCCGATCGCC
GAGGAGCTCG GGCTGATCGT GCCGCTCGGC GAGTGGGTGC TGCGCCGCGC CTGCGAGGAG
GCCGCCCGCT GGCCGGACGA GCTCAAGGTC GCGGTCAACG TCTCGGCGGT GCAGTTCACC
TCGGCGAGCC TCGTCACCGC CGTGCGCGAG GCGCTGCGGC GCACCGGCCT GCCGGGCCGG
CGCCTGGAGC TGGAGATCAC CGAGACGGTG CTGGTGGCCA ATCCCGGCGC CACGACGGCG
ATCCTCCACA GCCTCCGCGC GCTGGGCGTG CGCGTGGCGA TGGACGATTT CGGGACCGGC
TACTCGTCGC TCAGCTACCT GCGCTCGTTC CCCTTCGACA AGATCAAGAT CGACCAGTCC
TTCGTGCGCG ACCTGTGCGT GAAGGACGGG ACCGACTTCA TCGTGCGGGC GGTGATCGGC
CTCGGCGCCA GCCTCGGCAT GACGACGACC GCCGAGGGCG TCGAGACGGA GGCGCAGCTC
GCGCACCTGC GCGCCGAGGG CTGCGACGAG GTCCAGGGCT ACCTGTTCAG CCGCCCCGTC
CCCGTGTCGG AGGTCGCCTC GGTCATCCGC CGCTGGAACG GCGCGCTCCG GGCGATCGCC
TGA
 
Protein sequence
MRDPETPTDC GDRAGRSRAA ATLTGRVTTI RAAVGVAFLC VALLLGALAL STGLAILQVG 
GLATRTYDES LTSISFARAA AADFAKMRTT LIRRMQARDG AEVAKRDSEI TDLSAVLAED
LVIAAERAQS ERAARTAQAV QAGVASWESL RRELDPVTVR PDQAAALERQ ADAVEGQIDL
LINVMAGDGF TFRQAARQRV VGAIRWHAAA VALVILACGL IAWLLTRRIS GSVSAAAEAA
ERIAGGQLDD RIPTGGRDGL SRLLDAVAAM RSTIRALTLR EVSQRRVAEA LVTDALQTSR
EGVVVVDADG RIALANAQAL RFFVGLDAAI EAGLSLTRIA DQPRDKHREV LDDCFRALAR
DGDIRLADGR WLRVSRSATR QGGFIAVCSD ISVLKEQERR LTQTNLRLDA ALDTMSQGLC
LYDGQSRLMV VNRRYSEIYG LPPGAVVPGM TALEVLSASL AAGNHPGCDL EALLRQQRDA
FSNGAWQTHF QELSNGRIVA IDRREAADGG FVATYEDVTE RRRAEARIAF MAHHDMLTGL
PNRVAVGQQI DVAVAQAGRD QGFAVFAIDL DDFRPVNETL GHGIGDELLV AVANRLTACV
REIDCVARLG ADEFIVVQRG VDRPEDAAIL ARRIIEVVGA PYSLTHHTIS VGLTIGITLA
PSDGSNADKL LKNAEVALDR GKTEARGAFR FFEPAMDARL IARRIMERDL RDALAREAFE
VYYQPIYSLE TDRICGFEAL LRWNHPVRGF VSPAEFIPIA EELGLIVPLG EWVLRRACEE
AARWPDELKV AVNVSAVQFT SASLVTAVRE ALRRTGLPGR RLELEITETV LVANPGATTA
ILHSLRALGV RVAMDDFGTG YSSLSYLRSF PFDKIKIDQS FVRDLCVKDG TDFIVRAVIG
LGASLGMTTT AEGVETEAQL AHLRAEGCDE VQGYLFSRPV PVSEVASVIR RWNGALRAIA