| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_2393 |
|---|
| Symbol | |
|---|
| ID | 6138432 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | - |
|---|
| Start bp | 2546509 |
|---|
| End bp | 2548539 |
|---|
| Gene Length | 2031 bp |
|---|
| Protein Length | 676 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 76% |
|---|
| IMG OID | 641628109 |
|---|
| Product | PAS/PAC sensor hybrid histidine kinase |
|---|
| Protein accession | YP_001755071 |
|---|
| Protein GI | 170748811 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.00822967 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGATCGACA CGATGGCGCC TGTCCTGGCG CTCCTGACAG CGGCCGCTCT GGCCTTCGGC
CTCTGGCGCC TGCTCGGCAC GCGGCGCGCC GAGCGCGAGG CCGAGCGGCT GCAGGACCGC
ATCTGGCGGA TCAGCGAGAG CGAGGACCGC TACCGGGCCC TGGTGGCCGC CACCACCGAG
ATCATCGTCC AGCGCGATGC CCGCGGACGC ATCACCTACG CCAACGAGGA TTTCGCCCGC
CTGCTCGGCC GCGAGCCGAT CGCGCTGATC GGCTCCCGGG ACGATCTCGA GATCCTCGAC
CGGAACGCCG TGGAGATCGG GCCGGACGGG GTCCGCCGCC TGGAGGCGCA GGTCCGGACG
GCGGACGGGC GGGCGCGCTG GTTCGCCTTC GTGGAGATGC CGGTGGCGCA CGGCGACGCG
ACGCACTGGC TGCGCGCGGG CCGGGACGTG ACCGCGCGGG TCGAGGCGAT CCGCAGCCGC
GACGCGGCCC TGGAGCGCGC CGAGGCGGCG AGCGTCGCGA AATCCCGCTT CCTCGCGACG
GTGAGCCACG AGATGCGGAC GCCGCTCAAC GGCATCCTGG GCATGGCCGA CCTCGTGCTC
GGGACCGAGC TGAATCCGGA GCAGCGCACC TACGTTGAGG CGGTCCGCAC CAGCGGCCAG
GCGCTGCTCG GCCTGATCGA CGGGGTCCTC GACTTCTCGC GGATCGAGGC CGGGCGCCTC
GACCTCGCGG CCGAGCCCTT CGACCTGCCG GCGCTCTCCG AGGGGGTCGT CGAGCTGCTG
GCGCCCCGCG CCCAGGACAA GGGCATCGAG ATCGCCCTCG ACGTGGCCGA GGACTTCCCG
GCCGCCGTGC TGGGCGATGC CGACCGGGTG CGGCAGATCC TGATCAACCT CGCCGGCAAC
GCGATCAAGT TCACCGAGCG CGGCGGCGTC GGCGTCAGCC TGGGCTTCGC GCGGGCCGGG
ACCGGCGGCG AGGTCGTGCT CGCCGTGGCG GATACCGGCC CGGGCATCCC GGAGGAGAGG
CTGCCGATCC TGTTCGAGGA GTTCGAGCAG GGCGACGGCA GCGCGAGCCG CAGCCACGAG
GGCACCGGCC TGGGGCTCGC CATCACGCGG CGGCTCGTGA CCCGCATGGG CGGGCGGATC
GAGGCGGACT CGCGCCTCGG GCGGGGCTCG ACCTTCCGGG TCCTGCTGCC CCTCGCCGAG
GTCGCGGGGG CCGAGGGCGT CGGGCGCGCG CCGCTGCCGA CGCTCGCCCC GCGGCGCTGC
CTGATCGTCG CCGACTCCCC GTTCCAGGCG CCCTACCTCG CCCGCAGCCT GTCCCGGGCC
GGGGCCGCCA CCGTCATCGT CGACAGCCTG GATTCGGGCC TCGACGCCCT GTCGGGCGCG
GCCTTCGACG CGGTGCTGGC CGACCGGGCT CTGGGCGACA CGGCGGTGCG GCAGATCGCC
GACGCGGCGC GCGCCTGCGG GGTCCGCACC AGCCTCGTGC TCCTCTCGCC GTTCGACCGG
CGCGGCTTCG GGGCCCCCGG CGCGGCGGGT TTCGACGGCT ACCTGATCAA GCCGGTCCGG
CCGCGCTCCC TGTTCGAGCG CCTGCTCGCG TCGGCGGGCC CGGTCGAGGC CGCGGCGGCC
CCGCCGGCGG TGCCGCCGCG CGTCGGCAGC AGCCTTCGGG TCCTGCTGGC CGAGGACAAC
CCGATCAACG CCCTGCTGGC GACCCGGGCC CTGGAGCGGC TCGGCGCCAC GGTGGTCCAC
GCCGCCGACG GCCTCGAGGC CCTCGCGCGT CTGGAGACGG ACGGCCCGTT CGACCTCGCG
CTGATCGACG TGCGGATGCC CCGCCTCGAC GGGCACGAGA CCGCCCGGCG GATCCGCGCC
GCCGAATCGG ACGGGGCGCA GCGGCTCCAC CTCGTCGCGC TGACCGCGAA TGCCGGACGA
GAGGACGAGG CCGCCGCCCG GGCGGCCGGC TTCGACGGGT TCCTGGCCAA GCCGCTGAAC
CTGAAGCTGC TGCCGCCGCT GCTGGAGCGG CAGTCCGCGC GCGCCGCCTG A
|
|---|
| Protein sequence | MIDTMAPVLA LLTAAALAFG LWRLLGTRRA EREAERLQDR IWRISESEDR YRALVAATTE
IIVQRDARGR ITYANEDFAR LLGREPIALI GSRDDLEILD RNAVEIGPDG VRRLEAQVRT
ADGRARWFAF VEMPVAHGDA THWLRAGRDV TARVEAIRSR DAALERAEAA SVAKSRFLAT
VSHEMRTPLN GILGMADLVL GTELNPEQRT YVEAVRTSGQ ALLGLIDGVL DFSRIEAGRL
DLAAEPFDLP ALSEGVVELL APRAQDKGIE IALDVAEDFP AAVLGDADRV RQILINLAGN
AIKFTERGGV GVSLGFARAG TGGEVVLAVA DTGPGIPEER LPILFEEFEQ GDGSASRSHE
GTGLGLAITR RLVTRMGGRI EADSRLGRGS TFRVLLPLAE VAGAEGVGRA PLPTLAPRRC
LIVADSPFQA PYLARSLSRA GAATVIVDSL DSGLDALSGA AFDAVLADRA LGDTAVRQIA
DAARACGVRT SLVLLSPFDR RGFGAPGAAG FDGYLIKPVR PRSLFERLLA SAGPVEAAAA
PPAVPPRVGS SLRVLLAEDN PINALLATRA LERLGATVVH AADGLEALAR LETDGPFDLA
LIDVRMPRLD GHETARRIRA AESDGAQRLH LVALTANAGR EDEAAARAAG FDGFLAKPLN
LKLLPPLLER QSARAA
|
|---|
| |