| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_2359 |
|---|
| Symbol | murD |
|---|
| ID | 6138391 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | - |
|---|
| Start bp | 2496769 |
|---|
| End bp | 2498133 |
|---|
| Gene Length | 1365 bp |
|---|
| Protein Length | 454 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641628069 |
|---|
| Product | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase |
|---|
| Protein accession | YP_001755037 |
|---|
| Protein GI | 170748777 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
|---|
| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0150548 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCCG TCACCGTCTT CCAGGACAAG ACCGTCGCCC TGTTCGGACT CGGCGGCTCG
GGGCTCGCCA CGGCGCTGGC GCTGAAGGCA GGTGGCGCGG CCGTGCAGGC CTGGGACGAC
AATGCCGACA GCCTCGCGCG CGCGCGGGAG GCCGGCATCG AGACGCGGGA CCTCCGGGAG
GCCGACTGGT CCGGCTTCGC CGCCTTCGTG CTGAGCCCGG GCGTGCCGCT GACCCATCCC
GAGCCGCACT GGAGCGTCCG GCTCGCCCGG GACGCCGGCG TCGCGATCAT CGGCGACATC
GAGCTGTTCT GCCGGGAGCG GCGGGCGCGG GCGCCGGGGG CGCCGTTCGT GGCGATCACC
GGGACCAACG GCAAGTCGAC CACCACGGCG CTGATCGCCC ACGTGCTCGC GCAGGGGGGC
CGCGACGTGC AGATGGGTGG CAATATCGGC ACGGCGATCC TGTCGCTGGA GCCGCCGGCC
GCCGACCGCG TCCACGTGAT CGAGATGTCG TCGTTCCAGA TCGACCTGAC GCCGAGCCTC
GACCCGAGCG TCGGCGTGCT GATGAACATC ACGCCGGACC ATCTCGACCG GCACGGCACG
ATGGAGCAGT ACGCGGCCAT CAAGGAGCGC CTGATCCAGG GCGCCGGCCT CGCGGTGGTC
GGCGTCGACG ACGCCCCGAG CCGCGCCATC GCGGACCGCC GCGGCGCCGA CCTCGTGCGC
GTCCACGTGC CCCACGGCGA CGTTCTGTGC ACCGACGCGC TGACGGTGCG CGACGGGATC
GTCCGGGAGC CGGACGGGAC GGCCCTCGCC GACGTCAACG GGATCGGCTC GCTCCGGGGG
GCGCACAACT GGCAGAACGC CGCGGTGGCG GTCGCCGTGG CGCGGGCCCT CGACCTGTCG
CCGGAGCAGA TCCAGGCCGG CCTGACCTCG TTCCCAGGCC TGCCGCACCG GATGGAGGAA
GTCGGGCGGC GCGGCCACGT GCTGTTCGTC AACGATTCGA AGGCGACGAA CGCGGATTCC
ACCGAGAAGG CCCTCACCGC CTTCCGGGAC ATCCACTGGA TCCTCGGCGG CAAGGCCAAG
GAGGGCGGGA TCTTCCCGCT GGTGCCGTAT TTCGAGCGGG TCGCGCACGC CTACCTGATC
GGCGCGGCGT CGGACGCCTT CGCGGCGACC CTGGAGGGCG CCGTGCCCTA CACGCGCTGC
GAGACCCTCG AGAACGCCGT CCCGAAGGCC GCCGAGAACG CCGCCGCCTC GGGTGCACCG
GAACCGGTGG TGCTCCTGTC ACCGGCCTGC GCGTCCTACG ACCAGTTCCG GAACTTCGAG
ATCCGCGGCA ACCGCTTCCG CGAGCTGGTG CAGGCGCTGC CCTGA
|
|---|
| Protein sequence | MTPVTVFQDK TVALFGLGGS GLATALALKA GGAAVQAWDD NADSLARARE AGIETRDLRE
ADWSGFAAFV LSPGVPLTHP EPHWSVRLAR DAGVAIIGDI ELFCRERRAR APGAPFVAIT
GTNGKSTTTA LIAHVLAQGG RDVQMGGNIG TAILSLEPPA ADRVHVIEMS SFQIDLTPSL
DPSVGVLMNI TPDHLDRHGT MEQYAAIKER LIQGAGLAVV GVDDAPSRAI ADRRGADLVR
VHVPHGDVLC TDALTVRDGI VREPDGTALA DVNGIGSLRG AHNWQNAAVA VAVARALDLS
PEQIQAGLTS FPGLPHRMEE VGRRGHVLFV NDSKATNADS TEKALTAFRD IHWILGGKAK
EGGIFPLVPY FERVAHAYLI GAASDAFAAT LEGAVPYTRC ETLENAVPKA AENAAASGAP
EPVVLLSPAC ASYDQFRNFE IRGNRFRELV QALP
|
|---|
| |