Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrad2831_2276 |
Symbol | |
ID | 6138308 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium radiotolerans JCM 2831 |
Kingdom | Bacteria |
Replicon accession | NC_010505 |
Strand | + |
Start bp | 2406924 |
End bp | 2408528 |
Gene Length | 1605 bp |
Protein Length | 534 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641627986 |
Product | protein-export membrane protein SecD |
Protein accession | YP_001754954 |
Protein GI | 170748694 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0342] Preprotein translocase subunit SecD |
TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family [TIGR01129] protein-export membrane protein SecD |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.394363 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCGCT TCTCCCGTGC GAAGATCATC GCGACACTGG GTCTGATCCT GGTGGGGCTG ACGCTCGCCG TGCCGAGCTT CTTCTCGCCC GAGCAGCGCA AGAGCTTCGT TGCCGGCCTG CCCTCCTGGT TCCCCAGCTG GGTCGTGCCG ACGCGCGCCA TCGTGCTCGG CCTCGACCTG CAGGGCGGCT CGCAGCTCCT GCTCGAGGTG GACCAGAACG AGCTCATCGC CTCGCAGGCC AAGGCGCTGC GCGACGACGT GCGCCGCGTG CTCCAGCAGG AGAATGTCCG CGCCGACGGC GGCATCGGCC TGCTCCAGCG CGGCGTCCAG GTGAAGATCG ACGACGCCGC CGCCCGGGCC AAGGTCCTGC CGAAGCTCCA GGAGCTGTCG CAGCCGATCA CCACCTCCCT GGGCCAGACG GCGGCCCGCA CCCTCGACGT CTCCGAGCAG CCCGGCGGCG TGATCCGCCT GACCCTCACC GATGCCGGCA TCACCGACCG GACCCGCCGA GCCGTGAGCC AGGGCATCGA GGTCATCCGG CGCCGCCTCG ATTCCACCGG CACCACCGAG CCGTCGATCC AGCAGCAGGG CGCCGACCGG ATCCTGATCC AGGTGCCGGG CGAGCAGAAC CCGGAGCGCC TCGAGAAGCT CCTCGGCTCC ACCGCCAAGC TGGAGTTCCG CATGCTCGCC GACAGCCCCT CGGGCGACGT CGACATGCTG CCCTCCAAGG ACGAGAAGGG CGCCAAGGTC CCGGTGGAGC GCCGGGTCAT GGCCGACGGC GGCGAGCTGA CCGACGCGCA GCCGGCCTTC GACCAGCAGA CCCACGAGCC GATGGTGAGC TTCAAGTTCA ACCTGCGCGG CGCGCAGCGC TTCGGGCAGG CGACCTCGGA GAATATCGGC CGACGCATGG CGATCGTCCT CGACAACGAG GTCGTGTCGG CGCCCGTGAT CCGCTCGGCG ATCACCGGCG GCTCGGGCCA GATCACCGGC AACTTCACCG TGCAGCAGGC CAACGACCTG GCGGTCCTGC TGCGCGCCGG CGCGCTGCCG GCGAAGTTCA CCGTGGTCGA GCGCCGCGTC GTCGGCCCGG GTCTCGGCCG CGACTCCATC GAGGCCGGCA AGCTCGCGAC CCTGGTGGCG GCGGGCCTCG TGGTGGCCTT CATGTTCGCG ACCTACGGGA CGTTCGGCTT CATCGCCAAC ATCGCCCTCA TGGTCCATGT CGGGCTGATC CTGGGCCTGA TGTCGGTGCT AGAGGCGACC ATGACGCTCC CGGGCATCGC CGGCATCGTG CTCACCATCG GCACGGCGGT GGATTCGAAC GTGCTGATCT ACGAGCGCAT GCGCGAGGAG CAGCGGGCCG GCCGCTCGCT GATCTCGGCG CTGCAGGCGG GCTTCGACCG GGCCTTCGCC ACCATCATCG ACTCGAACTC GACCATGGCG ATCGCCGCCC TGATCCTGTT CTTCCTCGGC TCGGGCCCGG TGAAGGGCTT CGCCGTGGTC TTCATCCTCG GCATCCTCAC CACGGTCATC ACCGCGGTGA CGCTGACCCG GATGATGATC GCGGTGTGGT ACAACACGTT CCGGCCGAAG ACCCTGCCGT TCTGA
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Protein sequence | MLRFSRAKII ATLGLILVGL TLAVPSFFSP EQRKSFVAGL PSWFPSWVVP TRAIVLGLDL QGGSQLLLEV DQNELIASQA KALRDDVRRV LQQENVRADG GIGLLQRGVQ VKIDDAAARA KVLPKLQELS QPITTSLGQT AARTLDVSEQ PGGVIRLTLT DAGITDRTRR AVSQGIEVIR RRLDSTGTTE PSIQQQGADR ILIQVPGEQN PERLEKLLGS TAKLEFRMLA DSPSGDVDML PSKDEKGAKV PVERRVMADG GELTDAQPAF DQQTHEPMVS FKFNLRGAQR FGQATSENIG RRMAIVLDNE VVSAPVIRSA ITGGSGQITG NFTVQQANDL AVLLRAGALP AKFTVVERRV VGPGLGRDSI EAGKLATLVA AGLVVAFMFA TYGTFGFIAN IALMVHVGLI LGLMSVLEAT MTLPGIAGIV LTIGTAVDSN VLIYERMREE QRAGRSLISA LQAGFDRAFA TIIDSNSTMA IAALILFFLG SGPVKGFAVV FILGILTTVI TAVTLTRMMI AVWYNTFRPK TLPF
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