| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_2179 |
|---|
| Symbol | glpD |
|---|
| ID | 6138211 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | - |
|---|
| Start bp | 2321005 |
|---|
| End bp | 2322537 |
|---|
| Gene Length | 1533 bp |
|---|
| Protein Length | 510 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641627889 |
|---|
| Product | glycerol-3-phosphate dehydrogenase |
|---|
| Protein accession | YP_001754857 |
|---|
| Protein GI | 170748597 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.873983 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGCAG CACCGGGCCA GCGCGAGCCG TCCGACGCCT ACGATCTCCT GATCATCGGC
GGCGGCATCA ACGGCACGGG CATCGCCCGG GACGCGGCCG GCCGGGGCCT TTCGGTCCTG
CTGGCCGAGC GCGGGGATCT GGCGGGCTTC ACGTCCTCGT CCTCGACGAA GCTGATCCAC
GGCGGCCTGC GTTACCTCGA ATATTACGAG TTCCGCCTGG TGCGGGAGGC GCTCGCCGAG
CGCGAGCGGC TGCTGCGGCT CGCCCCGCAC GTGATCTGGC CCCTGCGCTT CGTCCTGCCC
CACGACGAGG GCCTGCGCCC GGCCTGGATG CTGCGGCTGG GCCTGTTCCT GTACGATCAC
CTCGCGCGGC TGCGCACCCT CCCGGGCTCG CACGGGGTCG ACCTGCGCAG CTCCGCCTAC
GGAGCGCCGC TGCAGCGGCG CCTGAAGCGC GGCTTCGTCT ATTCCGACTG CTGGGTCGAG
GACAGCCGCC TCGTGGTGCT AAACGCCATG GACGCCCGCG AGCGCGGCGC GACGGTGCTG
ACCCGAACCG GCGTGGTCTC GGCCCGGCGT GAGGGTGACG GCTGGGCCGC GACCTTGCGC
GACGAGCGCG GCGGCACCGA GCGGACGATC CGCGCGACGG CCGTCGTCAA CGCCGCCGGC
CCCTGGGTCA GCGAGACGCT CGGCGGCACG CTCGGCGTCA ACAGCCGCGC GGCGGTGCGG
CTGATCAAGG GCAGCCACAT CGTGGTCAAG CGCCTGTTCG ACGGCGATCA GGCCTACATC
CTGCAGCAGC CCGACAAGCG CATCATCTTC GCGATCCCCT ACGAGCGCGA CTTCACGCTG
ATCGGCACCA CGGACGTTCC CTACGAGGGC GAGCCCGGCC CGGTCACGAT CTCGGAGAGC
GAGACCGACT ATCTCTGCGG CTGCATCAAC CGCTCCTTCG ACACGACGCT CACCCCGGCC
GACGTGGTCT GGAGCTATGC GGGCGTGCGC CCGCTCTACG ACGACGCGGC GGAGAACGCC
TCGGCCGTGA CCCGCGACTA CGTCCTCGAC GTGGAGGACC AGGGCGGGAC TGCGGCGGTG
CTGTCGGTCT TCGGCGGCAA GATCACGACC TACCGGCGGC TCGCCGAGCA CGCGCTCGAG
AAGCTGAAGC CCTATTTCCC GCACCTCAAG AAGGCCTGGA CCGGCGACGC GGTCCTGCCC
GGCGGCGCCA TGAAGGACGC GGATTTCGAC CGGTTCCTCG CCGAGCTGAG GGCCGAGAAG
CCGTTCCTGC CGGAGGAGAC CGCCCGCCGG CTCGCCCGCG CCTACGGAAC CCGGGCCCGG
GACATCGTCG GGACGGCGCG GTCCATGGCG GATCTCGGCG AGGCCTTCGA CGGCGGCCTC
ACCGCCGCCG AGGTCGATTA CCTGCGCACC GAGGAATGGG CGGTCACCGC CGACGACATC
CTGTGGCGGC GGTCGAAGCT CGGCCTGCGC ACCGGCGCGG AGAGCGCCGC GCGCCTCGCC
GCCTACCTCG ACCGCAGGGC CGAGGCCGCC TGA
|
|---|
| Protein sequence | MAAAPGQREP SDAYDLLIIG GGINGTGIAR DAAGRGLSVL LAERGDLAGF TSSSSTKLIH
GGLRYLEYYE FRLVREALAE RERLLRLAPH VIWPLRFVLP HDEGLRPAWM LRLGLFLYDH
LARLRTLPGS HGVDLRSSAY GAPLQRRLKR GFVYSDCWVE DSRLVVLNAM DARERGATVL
TRTGVVSARR EGDGWAATLR DERGGTERTI RATAVVNAAG PWVSETLGGT LGVNSRAAVR
LIKGSHIVVK RLFDGDQAYI LQQPDKRIIF AIPYERDFTL IGTTDVPYEG EPGPVTISES
ETDYLCGCIN RSFDTTLTPA DVVWSYAGVR PLYDDAAENA SAVTRDYVLD VEDQGGTAAV
LSVFGGKITT YRRLAEHALE KLKPYFPHLK KAWTGDAVLP GGAMKDADFD RFLAELRAEK
PFLPEETARR LARAYGTRAR DIVGTARSMA DLGEAFDGGL TAAEVDYLRT EEWAVTADDI
LWRRSKLGLR TGAESAARLA AYLDRRAEAA
|
|---|
| |