| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_2159 |
|---|
| Symbol | |
|---|
| ID | 6138191 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | - |
|---|
| Start bp | 2300259 |
|---|
| End bp | 2302649 |
|---|
| Gene Length | 2391 bp |
|---|
| Protein Length | 796 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641627869 |
|---|
| Product | PAS/PAC sensor hybrid histidine kinase |
|---|
| Protein accession | YP_001754837 |
|---|
| Protein GI | 170748577 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR00229] PAS domain S-box |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.758044 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGAGA CTGAGAGCGG CCCAGGATCC GTCACGGATG CCGATTACCG CAACCTCGCC
GAGACGCTGC CGCAGCTCGC CTGGATCGCC GAGGCCGACG GCACGATCAT CTGGTACAAT
CAGCGCTGGT ACGACTACAC CGGCACCTCC CTCGACGAGA TGCGGGGCTG GGGCTGGCGC
ACGGTCCATC ACCCGGACCA CGTCGCGGCC GTGACCGAGC GCTACCGCGC CGCGATCACG
CTGGGCCGGT CCTGGGAGGA CACGTTCCCG CTGCGCGGCC GCGACGGGAG CTACCGCTGG
TTCCTGTCGA AGGCGCTGCC CCACCGGGAC GAGTCCGGGC GGATCCTGCG CTGGTACGGG
ACCAACACCG ACATCACCGG CCGCCGCGCG GTCGAGGAGC GCCTGCGCCA CTCCGAGCAG
CGCTTCCGGG CGCTGGTGGA CGCCTCGGCG GCGGTGATCT GGAACACCGA CGCGGCGGGC
GAGCTGATGC CGCCGCAGGT CCGGTGGAGC ACCTATACCG GGCAGACCGA GGAGGCCTAC
CAGGGCTGGG GCTGGCTGGA CGCCGTCCAT CCCGACGACC GGGGCCACGC GGCCGACGCC
TGGGCGGCCT GCGTCGAGGC GCGCGCGACC TACGAGGTCG AGTACAGGCT GCGCCGGTAC
GACGGGGTCT GGCGCGCCAT GGAGGTGCGC GGCGTGCCGG TCCTCGCCGA GGACGGCTCC
CTGCGGGAAT GGGTCGGCAC CTGCGTCGAC GTCACCGAGC GGAAGGAGGC CGAGGAGGCG
GTGGAGCGCG CCCGGCAGGC CGCCGAGGCG GCCAACCGGG CGAAGAGCCA GTTCATCGCC
AACATGAGCC ACGAGCTGCG CACGCCGCTC TCGGCGGTGA TCGGCTACTC CGAGATGCTC
GGCGAGGAGC TGGAGGATAT CGGCCAGGCC GCCCTCCTGC CCGACCTGCG CAAGATCGAG
GCGGCCGCCC GCCACCTGCT CTCGCTGATC AACGACGTGC TCGACATCTC GAAGATCGAG
GCGGGCCGCA TGACCGCCTC GGCCGAGACC TTCACGGTGT CGGACCTGCT CCGGGACGTC
TCCGACTCCA CCGGCTCCCT GGTTGAGAAG AAGGGCAACC GCTTCGTCCT GGACACCGGC
GCGGCCGGGA CGGCCGACCT GGGGTCCATG CACCAGGACC AGACCAAGAT CCGCCAGTGC
CTGCTGAACC TGATCGGCAA CGCCGCGAAG TTCACCGAGC GGGGAACGAT CACCCTGACG
GTGCGGCGGC ACCGGGAGGA GGGAGCCGAC TGGCTGTCCT TCGCGGTCGC CGACACCGGC
ATCGGCCTGA CCGAGGAGCA GATCGGGCGC CTGTTCGAGC GCTTCGTCCA GGCCGACGAT
TCGACGACCC GGCAGTTCGG CGGCACGGGC CTCGGGCTCG CCATCACCCG CGCGTTCTGC
CGGACGATGG GCGGCGACAT CGGCGTCGCC AGCACGCCGG GCGCGGGCGC GACCTTCACG
ATCCGCCTGC CCGCCACCCT GCGGCCCGAG GACGCGCCGC CCTCCGAGGC CGAGGCCCAC
ACGCCGGTGG AGCCGCACGA GCAGCACGAG ACGGTGCTGC TGGTCGACGA CGACCCGGCC
GCCCGGGAAT TGCTCCAGCG CTTCCTGGAA CGCGAGGGCT TCCACGTCCG CAGCGCCAAC
GACGGCCGCG CCGGCCTGAC GCTCGCCCGG GCCCTGAAGC CGCGCGCGAT CCTGCTCGAC
GTCGAGATGC CGCGCATGGA CGGCTGGGCG GTCCTGCACG CGGTGCGCAA CGACCCCGAC
CTCGCCGGTA CGCCGGTGAT CATGACCTCG GTCGTGGCCG AGCAGGGGCT CGGCCAGGCG
CTCGGCGCCA CCGACTACTT CGTCAAGCCG ATCGACTGGG ACCGGCTCAA GGGCCTGATG
GAGCGCTACC GGCCCGAGGC GCCGGAGGAT GCCCGCGTCC TCGTGGTCGA CGACGACGCG
GATGCCCGCG AGCGCCTGCG CCGGTCGCTC GGCCGCGAGG GCTGGACCGT CGACGAGGCG
GAGAACGGCC GGATCGCCCT GGAGCGGGTC AGCCAGGCGC GGCCGAGCCT GATCCTGCTC
GACCTGATGA TGCCCGAGAT GGACGGGTTC GGCTTCCTCC GGGCCTTGCG GGCGCGGCCC
GACGGCGACG TGCCCGTGGT GGTGCTCACC GCCAAGGAGG TCACGGCGGC CGAGAAGGAG
AGCCTGAACC GGCAGGCCGA CCGGGTGATC GCCAAGGGCT CCATGAGCCT CGCGGAGATC
GGCCGGCAAC TGCGCGTCCT CTACGCGCGT TCGGCGACCG AGCCGGTGCC GGGGCAGCTC
CAGGGGTTGC TCGATCGGCT CGCCGAGAAG GACGCGGGAG AACCACGATG A
|
|---|
| Protein sequence | MSETESGPGS VTDADYRNLA ETLPQLAWIA EADGTIIWYN QRWYDYTGTS LDEMRGWGWR
TVHHPDHVAA VTERYRAAIT LGRSWEDTFP LRGRDGSYRW FLSKALPHRD ESGRILRWYG
TNTDITGRRA VEERLRHSEQ RFRALVDASA AVIWNTDAAG ELMPPQVRWS TYTGQTEEAY
QGWGWLDAVH PDDRGHAADA WAACVEARAT YEVEYRLRRY DGVWRAMEVR GVPVLAEDGS
LREWVGTCVD VTERKEAEEA VERARQAAEA ANRAKSQFIA NMSHELRTPL SAVIGYSEML
GEELEDIGQA ALLPDLRKIE AAARHLLSLI NDVLDISKIE AGRMTASAET FTVSDLLRDV
SDSTGSLVEK KGNRFVLDTG AAGTADLGSM HQDQTKIRQC LLNLIGNAAK FTERGTITLT
VRRHREEGAD WLSFAVADTG IGLTEEQIGR LFERFVQADD STTRQFGGTG LGLAITRAFC
RTMGGDIGVA STPGAGATFT IRLPATLRPE DAPPSEAEAH TPVEPHEQHE TVLLVDDDPA
ARELLQRFLE REGFHVRSAN DGRAGLTLAR ALKPRAILLD VEMPRMDGWA VLHAVRNDPD
LAGTPVIMTS VVAEQGLGQA LGATDYFVKP IDWDRLKGLM ERYRPEAPED ARVLVVDDDA
DARERLRRSL GREGWTVDEA ENGRIALERV SQARPSLILL DLMMPEMDGF GFLRALRARP
DGDVPVVVLT AKEVTAAEKE SLNRQADRVI AKGSMSLAEI GRQLRVLYAR SATEPVPGQL
QGLLDRLAEK DAGEPR
|
|---|
| |