| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_2117 |
|---|
| Symbol | |
|---|
| ID | 6138149 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | - |
|---|
| Start bp | 2252523 |
|---|
| End bp | 2254193 |
|---|
| Gene Length | 1671 bp |
|---|
| Protein Length | 556 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641627827 |
|---|
| Product | thiamine pyrophosphate protein |
|---|
| Protein accession | YP_001754795 |
|---|
| Protein GI | 170748535 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.925616 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGCGGAT TGCCCCCACG CACCGGCGCG CAGGTGCTCG TCGATCAGCT CCGAGCGCAG
GGTGTCGAGC GCGTGACCTG CGTCCCCGGC GAGAGCTACC TCGCGGTGCT CGACGCCCTG
CGCGACAGCG GTATCGACGT GCTGGTCTGC CGGCAGGAGG GCGGCGCGGC GATCATGGCG
GAGGCCGCCG GCAAGCTCAC GGGCCGCCCG GGCATCTGCT TCGTCACCCG GGGGCCCGGC
GCCACCAACG CCTCCGCCGG CGTGCACATC GCCCGCCAGG ATTCGACGCC GATGATCCTG
TTCGTCGGCC AGATCGCCCG GCGGATGCGG GATCGCGAGG CGTTCCAGGA GGTCGATTAC
CGGCAGATGT TCGGCGGCGT CGCCAAGTGG GCGGTGGAGA TCGACGACGC CGCGCGCATC
CCGGAGATCC TCGCCCGGGC CTTCCGGGTC GCGATGCAGG GCCGCCCGGG CCCCGTCGTG
GTCGCCCTGC CGGAGGACAT GCTCGACGAC GTCGCGGCCG TGCCGGACGC GCCGCGCGTC
GTTCCGGCCG CGCCGGCCCC GTCCGGGGAT GACGTCGCGC GCCTGCGGGC GATGCTGGCG
GAGGCGCGGC GGCCGGTGGT GCTGCTGGGC GGATCCCGCT GGACGCCGGG CGCCGTCGCC
GCCATGGCCG CCTGGGCCGA GCGCCACGAC CTGCCGGTGG CGGTCTCGTT CCGGCGGGCT
CAGCTCTTCC CCGCCGACCA CCCGAACTTC GCGGGCGAGC TCGGGATCGG GCCGAATCCG
GCGCTGCTCG CCCGGATCCG GGAGGCCGAC CTGCTGCTGA TGGTGGGCGG CCGCCTCTCC
GAGATGCCCG CGCAATCCTA CGGCCTGCTC GGCATCCCCG ATCCCGGCCT GCCGCTGGTC
CACGTCCACG CCGACGCGGC GGAGCTCGGC CGGGTCTACC AGCCGGCGCT GGCGATCGAG
GCGGCGCCCG AGACCTTCTG CGCGGTCCTG CCGGATTTCG AGGCCACCGG GACCGGCCGC
GCCGCCGAGG CCCACGCCGC CTACCGCGCG TGGTCCGAGA CGCCGGAGCC GAAGCCCGGC
GCGTTCCAGT ACGGCGCGGC GATCACCTGG CTGCGCGAGC GGCTGCCGCC GGACGCGGTG
ATCTGCAACG GCGCCGGCAA CTTCGCCACC TGGGTCCACC GCTACTACCG GTTCCGCGCC
TTCGGCACGC AGCTCGCGCC GACCTCCGGC TCCATGGGCT ACGGGCTGCC GGCCGCCGTG
ATGGCCAAGC GCAGCCGCCC GGAGCGGATC GTCGTGGCGC TGGCCGGCGA CGGCGACGTG
ATGATGACCG TGCAGGAATT CGCCACCGCC GTGCAGTACG GGATCGCCGT CGTGGTGGTC
GTGCTCGACA ACGGCATGTA CGGCACGATC CGGATGCACC AAGAGCGCGA GTATCCCGGC
CGCGTCTCGG CGACGGAGCT GCGCAACCCC GACTTCGCGG CCCTCGCCCG CGCCTGCGGC
GGCCACGGCG AGCGCGTGGA GCGCACCGAG GAGTTCGCCC CCGCCTTCGA GCGCGGCCTC
GCCTCCGGGC TGCCGGCGAT GATCCACTGC CTCGTCGATC CCGAGGCGCT CACCCCGACC
ATGACCCTCG CGGCTATCCG CGAGAAGGCC CTGGCGGCGC AGCGGGGCTG A
|
|---|
| Protein sequence | MSGLPPRTGA QVLVDQLRAQ GVERVTCVPG ESYLAVLDAL RDSGIDVLVC RQEGGAAIMA
EAAGKLTGRP GICFVTRGPG ATNASAGVHI ARQDSTPMIL FVGQIARRMR DREAFQEVDY
RQMFGGVAKW AVEIDDAARI PEILARAFRV AMQGRPGPVV VALPEDMLDD VAAVPDAPRV
VPAAPAPSGD DVARLRAMLA EARRPVVLLG GSRWTPGAVA AMAAWAERHD LPVAVSFRRA
QLFPADHPNF AGELGIGPNP ALLARIREAD LLLMVGGRLS EMPAQSYGLL GIPDPGLPLV
HVHADAAELG RVYQPALAIE AAPETFCAVL PDFEATGTGR AAEAHAAYRA WSETPEPKPG
AFQYGAAITW LRERLPPDAV ICNGAGNFAT WVHRYYRFRA FGTQLAPTSG SMGYGLPAAV
MAKRSRPERI VVALAGDGDV MMTVQEFATA VQYGIAVVVV VLDNGMYGTI RMHQEREYPG
RVSATELRNP DFAALARACG GHGERVERTE EFAPAFERGL ASGLPAMIHC LVDPEALTPT
MTLAAIREKA LAAQRG
|
|---|
| |