Gene Mrad2831_2093 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_2093 
Symbol 
ID6138124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp2223171 
End bp2224163 
Gene Length993 bp 
Protein Length330 aa 
Translation table11 
GC content77% 
IMG OID641627802 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001754771 
Protein GI170748511 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGGAC CCGACCGTCC CCGCGGACAG GTCCGGCCGC GACGCGTCCG GGCATCCGAT 
CCGGTCGCGC GGCCGGTGCA CGGGGACGGG ACCGCCACCT TCGAGGCCCA CCGCCCCCGG
CTCCTCCGCA TCGCCTACCG CATGCTCGGC TCGCGCAGCG AGGCCGAGGA CGTCGTGCAG
GACGCGTGGC TGCGCTGGGT CGCGGCGGAC CGGACCGGGG TCGCGGCGCC CGACCGGTTC
CTCGCGCGCG TCGTGACGCG GCTCTGCCTC GACCAGATCA AGTCGGCGCG CGCGCGGCGG
GAGAGCTATG TCGGCCCCTG GCTGCCGGAG CCGCTGGTCG AGGCGGCGGC GGACGGCGTG
GACGAGGACG ACCTCACCCT GACCCTGATG CTCGCGCTCG AGCGGCTGTC CCCCTTGGAA
CGCGCGGCCT TCCTGCTCCA CGACGTGTTC GGCCTGCCGC TCGGCGACGT CGCGGAGACG
CTCGGGCGCG CGCCGCCGGC GGTGCGCCAG CTCGCGGCGC GCGCGCGCCG GAACGTCCGG
GCCGCGCGCC CGCGCTATCC CGTGACCCGC GACGAGGGCG AGCGCGTCGC CCGGGCGTTC
TTCGAGGCCT CCGCGAGCGG CGATGTCGCG CGGCTGCGGA CGCTGCTCGC CGACCGCGTG
ACGCTGTCCT CGGACGGGGG CGGCAAGGTG CTCGCCTTCG TCAATCCGAT CCGGGGGCTG
GAGCGCCTGC TCCGGCTCTA CGCGGGCGTG CGGCGCAAGT GGGGTGACGG CCGGGCGGCG
CTGGTCGCGT TCGTGTGGAT CGACGGGCTT CCGGGCTATG TCAGCCGCGA GCGCGGCGGC
CTCCTGCAGA CGACCGCCCT CGCGATCGAG AACGGCCGGA TCGACGCCAT CTACGTCACG
CGCAATCCCG ACAAGCTCCG CCACGTCGCG CGCGCCGTCG CGGCCGGGCC GACGCGCGGC
GGCGCGGCCG CGACCCGAGC GGGCCCGTCT TGA
 
Protein sequence
MTGPDRPRGQ VRPRRVRASD PVARPVHGDG TATFEAHRPR LLRIAYRMLG SRSEAEDVVQ 
DAWLRWVAAD RTGVAAPDRF LARVVTRLCL DQIKSARARR ESYVGPWLPE PLVEAAADGV
DEDDLTLTLM LALERLSPLE RAAFLLHDVF GLPLGDVAET LGRAPPAVRQ LAARARRNVR
AARPRYPVTR DEGERVARAF FEASASGDVA RLRTLLADRV TLSSDGGGKV LAFVNPIRGL
ERLLRLYAGV RRKWGDGRAA LVAFVWIDGL PGYVSRERGG LLQTTALAIE NGRIDAIYVT
RNPDKLRHVA RAVAAGPTRG GAAATRAGPS