Gene Mrad2831_2007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_2007 
Symbol 
ID6138036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp2131715 
End bp2132470 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content75% 
IMG OID641627714 
ProductN-acetylmuramyl-L-alanine amidase, negative regulator of AmpC, AmpD 
Protein accessionYP_001754685 
Protein GI170748425 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0212673 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGTCTCG CGCCCGACAG CCCCCTGGCC CGCCGCGTCG CGCCCTCGCC GAACCACGGC 
GCCCGCCGCG CGGGGCCGCT CGACATGCTG ATCCTGCACT ACACCGGGAT GGACAGCGGG
GCCGCCGCCC TCGCGCGCCT GCGCGACCCG TTGAGCGAGG TCTCGGCGCA CTACCTCGTG
TTCGAGGATG GCGGAACCGT CCAGATGGTG CCGGAGGCCC GCCGGGCCTG GCACGCCGGG
GCCGGCGCCT GGAAGGGCGA GACCGACGTC AATTCCCGGT CGATCGGGAT CGAGATCGTG
AATCCGGGCC ATGCCGGCGG GCTGCCGCCG TACCCGGAGG CACAGGTCGA GGCCGTGATC
GCGCTGGCCC GGGACATCCT CGGCCGCTGG CCGATCCCGC CGGAGCGGGT GCTCGCCCAT
TCCGACGTGG CGCCCGAGCG CAAGGAGGAT CCGGGGGAGA TCTTCCCGTG GGACCGCCTC
GCGGCGGCGG GGGTGGGTCA CCACGTGCCG CCCGCGCGCC TCCAGGACGG CCGCTTCCTC
GCGCGGGGCG ATGCCGGCCA GCCCGTCGAG GCGCTGCAGG CGATGTTCGC GCTCTACGGT
TACGACCTGC CGGTGACCGG GACGTTCGAC GCGCGCACCC GGGCTGTGGT CACCGCGTTC
CAGCGCCATT TCCGCCCGGC GCGGGTGGAC GGCGTGGCCG ACGCCTCCAC CATCACCACC
CTGCGCGACC TGATCGCGGC GCTGCCGGCG TCCTGA
 
Protein sequence
MSLAPDSPLA RRVAPSPNHG ARRAGPLDML ILHYTGMDSG AAALARLRDP LSEVSAHYLV 
FEDGGTVQMV PEARRAWHAG AGAWKGETDV NSRSIGIEIV NPGHAGGLPP YPEAQVEAVI
ALARDILGRW PIPPERVLAH SDVAPERKED PGEIFPWDRL AAAGVGHHVP PARLQDGRFL
ARGDAGQPVE ALQAMFALYG YDLPVTGTFD ARTRAVVTAF QRHFRPARVD GVADASTITT
LRDLIAALPA S