| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_1872 |
|---|
| Symbol | |
|---|
| ID | 6137901 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | - |
|---|
| Start bp | 2000181 |
|---|
| End bp | 2001422 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641627579 |
|---|
| Product | tryptophan synthase subunit beta |
|---|
| Protein accession | YP_001754550 |
|---|
| Protein GI | 170748290 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0133] Tryptophan synthase beta chain |
|---|
| TIGRFAM ID | [TIGR00263] tryptophan synthase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0911585 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCATCG CGCCCGAGCC CAACTCCTTC CGCACCGGCC CCGACGAGCG CGGCCGCTTT
GGCATCTTCG GCGGCCGCTT CGTCGCCGAG ACGCTGATGC CGCTGATCCT CGAGCTCGAG
GCGGCCTACG AGACGGCCAA GAAGGATCCG GCCTTCCAGG CCGAGATGGA GAGCTACGGC
ACGCACTATA TCGGCCGGCC GAGCCCGCTC TACTACGCCG AGCGCCTGAC CGAGCACCTG
CGCGCCAAGG CGCCGGCGGG GCAGGGCGCC AAGGTCTATT TCAAGCGCGA GGAGCTGAAC
CATACCGGCT CCCACAAGGT GAACAACGTG CTGGGCCAGA TCCTGCTGGC CCGCCGCATG
GGCAAGCCGC GGATCATCGC CGAGACCGGC GCCGGCCAGC ACGGCGTCGC CACCGCGACG
CTCTGCGCGC GCTTCGGCCT CAAGTGCGTC GTCTACATGG GCGCGGTCGA CGTCGCCCGG
CAGGCGCCCA ACGTCTTCCG CATGAAGATG CTCGGCGCCG AGGTGGTCCC GGTGGAATCC
GGCACCAAGA CCCTCAAGGA CGCCATGAAC GAGGCGCTGC GCGACTGGGT CACCAACGTC
GCCGACACGT TCTACTGCAT CGGCACGGTG GCGGGCCCGC ACCCGTACCC GGCGATGGTG
CGCGACTTCC AGTCGGTGAT CGGCCGCGAG ACCCGCGAGC AGATGATCGC GCAGGAGGGC
CGGATCCCGG ACTCCCTCGT CGCCTGCATC GGCGGCGGCT CGAACGCCAT GGGCCTGTTC
CACCCGTTCC TCGACGACCG CGAGGTCGAG ATCTTCGGCG TCGAGGCCGC GGGCCACGGC
GTCCAGTCGG GCCTGCACGC GGCCTCGCTG ACCGGCGGCA AGCCGGGCGT GCTGCACGGC
AACCGCACCT ACCTGCTGAT GGACGGGGAC GGCCAGATCG CCGACGCCCA CTCGATCTCG
GCCGGCCTCG ACTACCCGGG CATCGGCCCC GAGCACGCGT GGCTGCACGA GATGGGCCGG
GTCACCTACC TGTCGGCGAC CGATTCCGAG ACGCTGGAGG CGTTCAAGCT CTGCTCGATG
CTGGAGGGGA TCATCCCCGC CCTGGAGCCG GCCCACGCCC TGTCCAAGGT CCTGGAGCTC
GCGCCCCAGC GCCCGGCCGA GCACCTCATG GTGATGAACA TGTCGGGCCG CGGCGACAAG
GACATCCCGC AGGTGGCCGA GATCTTCGGC ACGAAGATCT GA
|
|---|
| Protein sequence | MTIAPEPNSF RTGPDERGRF GIFGGRFVAE TLMPLILELE AAYETAKKDP AFQAEMESYG
THYIGRPSPL YYAERLTEHL RAKAPAGQGA KVYFKREELN HTGSHKVNNV LGQILLARRM
GKPRIIAETG AGQHGVATAT LCARFGLKCV VYMGAVDVAR QAPNVFRMKM LGAEVVPVES
GTKTLKDAMN EALRDWVTNV ADTFYCIGTV AGPHPYPAMV RDFQSVIGRE TREQMIAQEG
RIPDSLVACI GGGSNAMGLF HPFLDDREVE IFGVEAAGHG VQSGLHAASL TGGKPGVLHG
NRTYLLMDGD GQIADAHSIS AGLDYPGIGP EHAWLHEMGR VTYLSATDSE TLEAFKLCSM
LEGIIPALEP AHALSKVLEL APQRPAEHLM VMNMSGRGDK DIPQVAEIFG TKI
|
|---|
| |