| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_1857 |
|---|
| Symbol | |
|---|
| ID | 6137886 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | + |
|---|
| Start bp | 1986017 |
|---|
| End bp | 1987633 |
|---|
| Gene Length | 1617 bp |
|---|
| Protein Length | 538 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641627564 |
|---|
| Product | gluconate 2-dehydrogenase (acceptor) |
|---|
| Protein accession | YP_001754535 |
|---|
| Protein GI | 170748275 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 0.413717 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGCGCA CGAGAGCCCT CTCCTCCGGC CGCCTGCCGC CGATCCGGAC GGCGCCGATC
CTGGGGAGCC TGTTCCTGGC GAGCCTGTTC CCGGCCGCGC CGGCGCTGGC GCAGGACGGG
TCGGCCGACC AGATCGCGCG CGGCAAGTAT CTCGTGACCA TGGGCGACTG CGCGGCCTGC
CACACGGCGC CGGGCGGCAA GTACCTCGCC GGCAACTACG CGCTGAACAT GCCCTTCGGC
GTGATCATGA CCCCCAACCT CACCCCCGAC AAGGAGACCG GCCTCGGCAA CTGGAGCTAC
GCCGACTTCG ACCAGGCGTT CCGGCACGGC TACAGCAAGA ACGTCGGCTA CCTCTACCCG
GCCTTCCCGT TCGGCTGGTT CACCAAGGTC ACCGACGAGG ACACCCAGGC GATCTGGGCC
TACCTGCAAT CGGTCCCGGC CGTGAACGAG AAGCGGCAGG AGAGCCAGAT CCCGTTCCCG
TTCAGCGTCC GCACGGCGCT GGTGACGTGG CGGACGGCCT TCTTCACCGA CGAGCGCTTC
AAGCCCGACC CGAAGGCCAG CGCCGAGGTG AACCGCGGCG CCTACCTGGT GGAGGGCCTC
GGCCACTGCG CCATGTGCCA CAACGAGAAC AAGCTCGTCG GCAATTCGAG CTTCGCGGGC
CGGTTCGGCG GCGGCGTGAT CGACGGCTGG TACGCCCCCA ACATCACCCC GGACGGCCAC
CAGGGCATCG GTGCCTGGAC CGACGAGCAG GTGGTGACCT ACCTCAAGAC CGGCACCGCC
CCGGGCGACC GGCCGGGCGT CGCCGCCGGC CCGATGCGCC AGACCATCAT GGAATCCCTC
TCCAAGGTGA AGGAGGAGGA CCTCAAGGCC ATGGTCGCGT ACCTGCGCAC CGTGCCGGCC
AAGCAGACCT ACAAGCCGAA GGACCTCACG GCCTTCGACA CGCCCGACGC GCCGGGCGCC
TCCACCTACT TGACCTACTG CTCCTCGTGC CACCAGCCCG ACGGCAAGGG CATCGAGGGC
GCGGTCCCGG CGCTCGCCGG CAACACCTCG GTCCAGTCCG ACGGGCCCGA GACGGTGCTG
CGGGTGATCT ACGGCGGCCT CGCCGCCCAG AGCGGGCTGG CCCCGATGGT GGCGATCGGC
CAGCAGATGA CCGATGTCGA GGTGAAGAAC GTCACCGACT ACATCCGCAA TTCCTGGGGC
AACAGGGCGC CGCCGGTGAC CGGCGACAAG GCCTCGGAGG CGCGCGCCGC CACCCGGACC
ATGCTGGCCG GCACCGCCCC CTGCGCGGAG ATCGAGCAGG ACAAGCTCAA GGCCGCCTTC
GAGAAGCTCG GCATCCAGGC GAGCCTGACC GGACTGAAGC AGCAGGACTT CGTCCCGACC
CTCGCCCGGC TGGTCCAGCA GGTGAAGGCG GAGCCGACCG GCGTCACCGA CGACGACATC
GTCAACGGCC TGACCACGGC CTTCTGCAAG GTCGGCCGCG ACGACCCGCA ATACGGCAAG
CCGAGCTGGC CCGCGGTGAT CGGCACCTTC GCCAACGTCG CCTACAGCCA AGTGAAGCAC
CCGGAGAAGC AGGCCGCCAA CGTCCCCTCC GCCACCACGC CGCCGGCCAG GAACTGA
|
|---|
| Protein sequence | MQRTRALSSG RLPPIRTAPI LGSLFLASLF PAAPALAQDG SADQIARGKY LVTMGDCAAC
HTAPGGKYLA GNYALNMPFG VIMTPNLTPD KETGLGNWSY ADFDQAFRHG YSKNVGYLYP
AFPFGWFTKV TDEDTQAIWA YLQSVPAVNE KRQESQIPFP FSVRTALVTW RTAFFTDERF
KPDPKASAEV NRGAYLVEGL GHCAMCHNEN KLVGNSSFAG RFGGGVIDGW YAPNITPDGH
QGIGAWTDEQ VVTYLKTGTA PGDRPGVAAG PMRQTIMESL SKVKEEDLKA MVAYLRTVPA
KQTYKPKDLT AFDTPDAPGA STYLTYCSSC HQPDGKGIEG AVPALAGNTS VQSDGPETVL
RVIYGGLAAQ SGLAPMVAIG QQMTDVEVKN VTDYIRNSWG NRAPPVTGDK ASEARAATRT
MLAGTAPCAE IEQDKLKAAF EKLGIQASLT GLKQQDFVPT LARLVQQVKA EPTGVTDDDI
VNGLTTAFCK VGRDDPQYGK PSWPAVIGTF ANVAYSQVKH PEKQAANVPS ATTPPARN
|
|---|
| |