| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_1834 |
|---|
| Symbol | bchD |
|---|
| ID | 6137863 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | - |
|---|
| Start bp | 1959934 |
|---|
| End bp | 1961634 |
|---|
| Gene Length | 1701 bp |
|---|
| Protein Length | 566 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 80% |
|---|
| IMG OID | 641627541 |
|---|
| Product | magnesium chelatase subunit D |
|---|
| Protein accession | YP_001754512 |
|---|
| Protein GI | 170748252 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1240] Mg-chelatase subunit ChlD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0704313 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGGGCG CGCGGCTTCT CCCTCCCCCC GCAGAGGTCG GAAGGCGTGC GCTCGATCTC
TGGGCCGATG CCCGTCTCGC CGCCCGTCTG CTCGCCGCCG ACCCGCACGG GCTCGGCGGC
GCGGTGCTGC GCGCCTCCCC CGGCCCGGTG CGCGAGCGCT GGCTCGAGAT CCTGAGGGCG
GCGCTGCCGC CCGGAACGCC CTGGCGGCGC CTGCCGCCCG GCATCGGCGA CGACGGCCTG
CTCGGCGGCC TGGATCTCGC CGCGACCCTG GCGGCGGGCC GCCCCGTCGC GCGGGCCGGC
CTGCTCGCGG AGGCCGATGG CGGGATCGTC GTCGTCCCCA TGGCCGAGCG TCTGCCGCCG
GGCACCGCGT CGCGGCTCGC GGCCACCCTC GACACCGGCA CGGTCTCCGA CCGCCGCGCC
CGGTTCGGCC TGATCCTCCT CGACGAGGGC GTGGCGGACG AGACGGTCGC CGAGGCGCTG
GCCGATCGCC TCGCCTTCCG GATCGACCTG AGCGGGCTCG GCCTGGCGGA GGCCGCGGCG
GCCGAGCCAG AACCCGCCGC AGGCGCACCG GAGCCCGACC CGGTCGGCAG CCTCTGCGCC
CTGGCCGAGG CCTTCGGGAT CGCGTCGCTG CGCGGGCCGA TCCTGGCAGC GCGGGTGGCG
CGCGCCCTCG CGGGAGTCGG GCCGATCGAC CAGGCGGCGA TCGTGGCGGC CGGGCGCCTG
GTCCTGGCGC CGCGCGCCAC GCGCCTGCCC GCACCGGAGC AGCCCGCCCC CGAGACCGCG
GAGGCGCCGC CGGCGGAGCC GCCCGAGCCG AACGAGGCGG AGGCGTCGGA TCCGGCCGCC
GCGGAGGCGC CCGACGACGT CGTGCTGGAA GCGGTGCGCG CCGCGATCCC GCCGAACCTC
CTCGACCAGC TGCTGGCGGG CGCGCAGCGT CTCCCGGCCG CGAGGGCCGG CCGGGTCGGG
CAGGCGGCCT CCGCCCGCAC CGGGCGCCCT GTCGGCAGCC GGCGGGGCGA CCCGCGGCGG
GGACGCCTGG ACCTGCTCGC CACCCTGCGG ACGGCGGCGC CCTGGCAGGC GCTGCGGCGC
GACCCGGAGG AGGCGCGCCG CATCGTGGTG CGGCGGGACG ATCTGCGGAT CCGGATCCTC
AAGCAGCGGA CCGAGACCAC CACGGTGTTC TGCGTGGACG CCTCGGGCTC GGCCGCCCTG
GAGCGGCTGG CCGAGGCCAA GGGCGCGGTC GAGCTGCTGC TGGCGGAGGC CTATGTCCGC
CGGGACCGGG TGGCGCTGGT GGCGTTCCGC GGCGCCGGCG CGGATCTGGT CCTGCCGCCG
ACCCGCTCGC TCACCCGGGC CAAGCGGGGG CTCTCGGGAC TGCCGGGCGG AGGCGGGACG
CCCCTCGCGG CGGGAATCGA CGCCGCGGTC GCGGTGGCGC TGGGCGTGCG CCGCGGCGGC
AGCCGGCCGG CGATCGTGCT GCTGACCGAC GGGCGCGCCA ACGTCGCGCG GTCGGGGGAG
GGGGGACGGG TCCGCGCGGG CGCGGAGGCC CTGCAGGCGG CCCGCGCGTT GCGTGCGGCC
GGGCTGCCGG CCCTCGTGGT CGATACCGGC ACACGGGGTG AGGAGGCCCG TTCGGTCGCG
AGCGCGATGG GCGCCCGCTA CCTGAAGCTG CCGCGGGTCG AGGCCGGTCA GATCAGCGCG
GCGGTGCGGG CGGCGCTCTG A
|
|---|
| Protein sequence | MTGARLLPPP AEVGRRALDL WADARLAARL LAADPHGLGG AVLRASPGPV RERWLEILRA
ALPPGTPWRR LPPGIGDDGL LGGLDLAATL AAGRPVARAG LLAEADGGIV VVPMAERLPP
GTASRLAATL DTGTVSDRRA RFGLILLDEG VADETVAEAL ADRLAFRIDL SGLGLAEAAA
AEPEPAAGAP EPDPVGSLCA LAEAFGIASL RGPILAARVA RALAGVGPID QAAIVAAGRL
VLAPRATRLP APEQPAPETA EAPPAEPPEP NEAEASDPAA AEAPDDVVLE AVRAAIPPNL
LDQLLAGAQR LPAARAGRVG QAASARTGRP VGSRRGDPRR GRLDLLATLR TAAPWQALRR
DPEEARRIVV RRDDLRIRIL KQRTETTTVF CVDASGSAAL ERLAEAKGAV ELLLAEAYVR
RDRVALVAFR GAGADLVLPP TRSLTRAKRG LSGLPGGGGT PLAAGIDAAV AVALGVRRGG
SRPAIVLLTD GRANVARSGE GGRVRAGAEA LQAARALRAA GLPALVVDTG TRGEEARSVA
SAMGARYLKL PRVEAGQISA AVRAAL
|
|---|
| |