Gene Mrad2831_1611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_1611 
Symbol 
ID6137639 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp1715809 
End bp1717158 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content72% 
IMG OID641627317 
Productmajor facilitator transporter 
Protein accessionYP_001754289 
Protein GI170748029 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.000248187 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGACGCGG GCGACGTGGG CTTGCGCGGG GCGGCCAGCG CCCCGTGGTA CGCGGGTCTC 
ACCCGGCGCC ACTGGCGGAT CCTGTGGGGC AGCTATCTCG GCTGGATCTT CGACGGCTAC
GAGGCGGTGG CCCTGGTCTA CGCCCTGCGC CCGGCCCTGG CCTCGATCCT CACCCCCGAG
CAGGCCCAGG CCCCGGCCTT CTACGTGGGT CTCGCCATCG GCATCACCCT GCTGGGCTGG
GGGATCGGCG GCCTGATGGG TGGGATCGCG GCCGACTATA TCGGCCGCAA GCGCATGATG
ATGGTGTCGA TCCTGGGCTA CGCGCTGTTC ACGGGGCTCA CCGCCTTCGC GGAGAGCTTC
GCGCAGCTCG CCGTGCTGCG CTTCATCACC GGGCTCGCCA TCGGCTCGGA ATGGTCCACC
GGCATCGCCC TCGTGGCCGA GACCTGGCCG AACCGGGCGC GCCCGAAGGG CTGCGGCTTC
CTGCAATCGG GCTTCGGCGG CGGCGCCGTG CTGGCCGCCA TCGTGTGGGC CGTGCTCGCC
GCCACCGAGC CGCTGGGCCC GGAATCCTGG CGGATCCTGT TCGCGCTGGG CGCGCTCCCC
GCCTTCGTGT GCCTGTACCT GCGGCGGGCG CTGGAGGAAT CCGAGCAGTG GATGCGGGCG
CTCAGGGCGC AGCGCTGGGC GGCCACCGCG GAGGACGCGA ACCGCGCCCC GCGGAGCGCG
CGGCGCCCGT TCTCCCTGAC GGAGATCTTC CGCGAGCCCG AGAGCCGGCG GCGGGTCCTG
CTCGCCACGC TGCTGTCCTT CGCCACCACG GTGGGCTGGT GGGCGGTCTC GTCCTGGCTG
CCGGCCTACA CGGAGGGGCT CGCCAAGGCC GCGGGCGCGC CGGCCAATCT CTGGGGCCCG
CGCATGGGCA TCGTCTACAA TATCGGGGCG ATCACCGCCT ACGTGATCTC CGGCTTCGTG
GCCGACGCGA TCGGCCGCCG CGCCTTCCTG CTGGTCACCT ATGTCGGCTG CATCGCCACG
TCGCTCGCCT GCTACCTCTG GACCGGCGGG CTGGTGCCGT TCATGGCGCT CGCTTTCCTG
AACGGGTTCT TCACCCTGGG CTTCGCCTTC TCGTGGATGG CGATCTACCT CGCGGAGCTG
TTCACCCCGG CGGTCCGGGC GACGGCGGCG AGCGTCGTGT TCAACGGCGC GCGGCTGATC
GCCTGGATCT TCCCGATCAT CGCCGGGCAG ATCGTGACCG CCTTCGGGGG CGTCGCCGCG
GCGGCGCTGA CGCTCTCCAG CGTCTACGTG ATCGGCCTCG TCGTGCCGTG GTTCATGCCG
GAGACGCGGG GCCGGCCGCT GCCGGAATAG
 
Protein sequence
MDAGDVGLRG AASAPWYAGL TRRHWRILWG SYLGWIFDGY EAVALVYALR PALASILTPE 
QAQAPAFYVG LAIGITLLGW GIGGLMGGIA ADYIGRKRMM MVSILGYALF TGLTAFAESF
AQLAVLRFIT GLAIGSEWST GIALVAETWP NRARPKGCGF LQSGFGGGAV LAAIVWAVLA
ATEPLGPESW RILFALGALP AFVCLYLRRA LEESEQWMRA LRAQRWAATA EDANRAPRSA
RRPFSLTEIF REPESRRRVL LATLLSFATT VGWWAVSSWL PAYTEGLAKA AGAPANLWGP
RMGIVYNIGA ITAYVISGFV ADAIGRRAFL LVTYVGCIAT SLACYLWTGG LVPFMALAFL
NGFFTLGFAF SWMAIYLAEL FTPAVRATAA SVVFNGARLI AWIFPIIAGQ IVTAFGGVAA
AALTLSSVYV IGLVVPWFMP ETRGRPLPE