Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrad2831_1590 |
Symbol | |
ID | 6137618 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium radiotolerans JCM 2831 |
Kingdom | Bacteria |
Replicon accession | NC_010505 |
Strand | + |
Start bp | 1678142 |
End bp | 1681072 |
Gene Length | 2931 bp |
Protein Length | 976 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641627296 |
Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
Protein accession | YP_001754268 |
Protein GI | 170748008 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.0194407 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGAAGC TCGCACGGCC GGAAGTCAAG ACACCCTTGC GCATCCTCGC CCTCCTCCTG ACCCTGGTCG GCGGTCTCGT CGGTGCCCTC GCGCTCACGC TCGCCGCGAG CGCGCCCGCC CGGGCCGTGG AGGCGGTCCG CGTCACCCTC GACGCGCCGG TGATCGACCT GACGACCGCG ATCGAGCGCT ACCGCTCCGA CGGCGACCTG ATCCAGATCT CCACGGCGCC CGGCAAGGAC GGCATCGTCC GGCGCATCGT CGTCAAGGCG CGCGACGCCG GCGCCCGGCC CGACTGGATC GTGTTCGCGC TCACCAACGA CACCGACGAG CAGATCGACC GCATCCTGGT CGCCCCGCAT TTCCGGCTGG TCGATTCCGG GGTGATCTGG CCCGATCTCG GCGGCTCGCG CATCGCCGCC ATCACGGCGA GCCAGGGCAT CCGGCCCGAG CGGGACGAGA ACCCGGAGGC CGACCAGTTC ACCATCACGC TGGATCCCGG CGCCACCGTC ACCTACGTGG CCGAGCTGCG CGGCTCCAAC GTCCCCCAGC TCCGCCTCTG GGACCAGGAC GCCTACCGGC GCAAGACCGC CGGCCTGACC CTCTACAAGG GCATCATCAT CGGGATCAGC GGCCTGCTCG CCCTGTTCCT GACCATCGTG TTCGTGGTCA AGGGCGCGAT CATCTTCCCG GCCGCCGCCG CGCTCGCGTG GTCGGTGCTG GCCTATGCCT GCATCGATTT CGGGTTCCTG CAGCGGGTCT TCCCGGTCAC CGAGCTCGCC GAGCGGGTCT ACCGGGCCTC CGCGGAGGCG GTGCTCGGGG CGACGCTGCT GGTCTTCCTG TTCGCCTATC TCAACCTCGC CCGCTGGCAC GTGCGCTACA GCCACGTGGC GTTCTTCTGG CTCGCCTTCC TGGCGGGCCT CGTCGGGCTC GCGGTGTTCG ACCCGCCGGT GGCGGCGGGC GTGGCGCGGA TCTCGATCGC CGCGGTGGCC GGCATCGGCC TGCTGCTGAT CGTCTACCTC GCCGCCCATA ACGGCTACGA CCGCGCCATC CTGCTGGTGC CGACCTGGCT GCTTCTGGTG GTCTGGGTCA CGGCGGCGGG CTTCGCGGTC ACCGGCCAGA TCGGCAGCGA CCTCGTGCAG CCCGCCCTGA TCGGCGGCCT CGTGCTGATC GTGATGCTGA TCGGCTTCAC GGTGCTCCAG CACGCCTTCG CGGGGGGCGG CCTCAGCCAC GCCCTCGTGT CCGACACGGA GCGGCGCGCG CTGGCGCTGA CCGGCGCCGG CGACGTGGTG TTCGACTGGG ACGTGCCCGC CGACCGGGTC TTCGTCGGCC CGGAGATCGA GGGCCAGCTC GGCCTCGCCC GCGGCACCCT CGAGGGGCCG GCGACCAACT GGCTCGGCGC GCTCCACCCC TTCGACGTGG AGCGCTACTC GGCGGCCCTC GACACGGTGA TCGAGGAGCG GCGCGGGCGC ATCGTCCACG ATTTCCGCCT GCGCTCGGAG GCCGGCACGT TCTTCTGGTA CCGGCTGAAG GCGCGGCCGG TGATCGGCGC CGACGGCGAG GTGATCCGGG TGGTCGGCAC CATCGCGGAC GTCACCGAGA TCAAGACCGC CGAGGAGCGC CTGCTCCACG ACGCCGTGCA CGACAGCCTG ACCGGCCTGC CGAACCGCGA GCTGTTCGGC GACCGCCTCG ACGCGGCACT CGCCTTCGCC GGCCAGGACC AGCGCCTCAA GCCCACCGTG ATCGTCCTCG ACGTCGACCG GTTCAAGGGC ATCAACGACG CGATCGGCCT GTCGGCGGGC GACTCGATCC TGCTGACCCT GTCGCGGCGC CTCGGCCGCC TGCTGCGGCC GCAGGACACG CTGGCCCGGG TCGCCGGCGA CGAGTTCGCG GTGATCCTCC TCTCCGAGCG CGACCCCGAC CGGATCCTGG CCTTCGCCGA GATGATCCGC CGGGCGATCG CCACGCCGAT CACCTACGCG GACCGGGAGA TCTTCCTGAC CGTCTCGATC GGGCTCGCGC TCTACGAGGC GGGCGCCAAC CTGAAGCGCG ACGAGGTGTT CAAGAGCGCC GAGATCGCCA TGATCCAGGC CAAGCGCAAC GGCGGCGACC GGATCGAGGT GTTCCGCGCC CACATGCGCA CCGACCGCTC GGACCGGCTG ATGCTGGAGA GCGACCTGCG CAAGGCGATC GAGCGCAACG AGATGCGGGT GCTGTTCCTG CCGGTGGTGC GCCTCGAGGA CCGCACCGTG GCGGGGTTCG AGACCGTGCT GCGCTGGGAC CATCCGAAGC TCGGGCGCAT CCCCGCCTCG ACCTTCCTGC CGCTCGCCGA GGAGAGCGGC TTCGTGGTCA ATCTCGGCAT CTTCGCCCTG GAGCGCACCG CCCTGGAACT CGCGGCGTGG CAGCGCTCCC TGGAGGTCGA GCCGCCGATC TTCGCGGCCT GCAACCTGTC CTCGCGCCAG CTCCTGCGCC ACGACCTCCT GCACGACGTG AAGACCGTGC TGGCCCGCTC GGGGGCCCTG CCCGGCTCGC TCAAGCTGGA ATTCAGCGAG AGCCTCGTGA TGGAGAACCC GGAATACGCC GCCCAGATGC TGGCGCGGAT CCACGACCTC GGGGCGGGCC TGTGCCTGTC GGATTTCGGG ACCGGCTACT CGGCCCTCTC CTATCTCCAG CGCTTCCCGT TCGACACGAT CAAGGTCGAC GCGACCTTCG TGCGCCAGAT CGGCACCGGG CAGACCGCGA TCCTGCGCTC GATCGTGCGG ATGGCGAGCG AGCTGAACCT CGCCATCGTG GCGGAGGGCT GCGAGTCCGA GGCCGACGCC CAGGCCCTCG CCGGGCTCGG CTGCGAGTAC GCCCTGGGCC CGGCCTTCGG CGAGCCGATG ACCATGCTGC AGGCCCGCCA GATCGTCGGC GCCGCCCCGG AAGCGGCCTG A
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Protein sequence | MPKLARPEVK TPLRILALLL TLVGGLVGAL ALTLAASAPA RAVEAVRVTL DAPVIDLTTA IERYRSDGDL IQISTAPGKD GIVRRIVVKA RDAGARPDWI VFALTNDTDE QIDRILVAPH FRLVDSGVIW PDLGGSRIAA ITASQGIRPE RDENPEADQF TITLDPGATV TYVAELRGSN VPQLRLWDQD AYRRKTAGLT LYKGIIIGIS GLLALFLTIV FVVKGAIIFP AAAALAWSVL AYACIDFGFL QRVFPVTELA ERVYRASAEA VLGATLLVFL FAYLNLARWH VRYSHVAFFW LAFLAGLVGL AVFDPPVAAG VARISIAAVA GIGLLLIVYL AAHNGYDRAI LLVPTWLLLV VWVTAAGFAV TGQIGSDLVQ PALIGGLVLI VMLIGFTVLQ HAFAGGGLSH ALVSDTERRA LALTGAGDVV FDWDVPADRV FVGPEIEGQL GLARGTLEGP ATNWLGALHP FDVERYSAAL DTVIEERRGR IVHDFRLRSE AGTFFWYRLK ARPVIGADGE VIRVVGTIAD VTEIKTAEER LLHDAVHDSL TGLPNRELFG DRLDAALAFA GQDQRLKPTV IVLDVDRFKG INDAIGLSAG DSILLTLSRR LGRLLRPQDT LARVAGDEFA VILLSERDPD RILAFAEMIR RAIATPITYA DREIFLTVSI GLALYEAGAN LKRDEVFKSA EIAMIQAKRN GGDRIEVFRA HMRTDRSDRL MLESDLRKAI ERNEMRVLFL PVVRLEDRTV AGFETVLRWD HPKLGRIPAS TFLPLAEESG FVVNLGIFAL ERTALELAAW QRSLEVEPPI FAACNLSSRQ LLRHDLLHDV KTVLARSGAL PGSLKLEFSE SLVMENPEYA AQMLARIHDL GAGLCLSDFG TGYSALSYLQ RFPFDTIKVD ATFVRQIGTG QTAILRSIVR MASELNLAIV AEGCESEADA QALAGLGCEY ALGPAFGEPM TMLQARQIVG AAPEAA
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