Gene Mrad2831_1362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_1362 
Symbol 
ID6137381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp1426807 
End bp1427568 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content72% 
IMG OID641627062 
ProductECF subfamily RNA polymerase sigma-24 factor 
Protein accessionYP_001754043 
Protein GI170747783 
COG category[K] Transcription 
COG ID[COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog 
TIGRFAM ID[TIGR02937] RNA polymerase sigma factor, sigma-70 family 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00683683 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCCGACA CCGAAGGCTC ATCGCTCCTC GATCCCATCG CGGATGTCGC AGAGGAGGCC 
GGGGACGAGA CTCGCTTCGG CCTGCCGGAG GCCGTGCGGG CCCATCTCGG CACCCTGCTC
GGCCGCACCT ACGACCGGAT CGGCCAGGAC GCGGACGGTG CCACGAACCC CTTCGCGGAC
CTGCTCGCGC GCCTGGAGAT CGCTCTCGCG CAGGCCGAGG GCGAGCGGGA CAAGACCTTC
CGCGCGGGCC TGCTGGAGGT GGTGCCGGCG CTGCACCGGT TCGCGGTCTC GCTGACGCGC
GACCCGGCCG CGGCGGACGA TCTCGTGCAG GACACCCTGC TGCGCGGCTG GCGCGGCCGC
GGCGGCTTCA CCCCCGGGAC CAACCTGGAG GCGTGGCTGT TCACGATCCT CCGCAACGTC
TTCTACAGCC AGCACCGCAA GCAGGGCCGC GAGGTCGCCG ACACCGACGG CAACTACGCC
GAGCGGCTGA CCAGCATTCC CGAGCAGGGG GGCCACCTCG ACCTGCAGGA CGTGCGCGCG
GCCCTCGACC GCCTCGCGCC GGTGATGCGC GAGGCGCTGG TCCTCGTGGC GATCGAGAAC
CTGAGCTACG AGGAAGCCGC CGTCGTCATG AACTGCCGGA TCGGCACCGT GAAGAGCCGG
GTCTGGCGCG CCCGCGAGCA GCTCGCGCGC ATGCTCGGCT ACGGCGGCGA CGAGATCGGC
AGTGACGGGG TCATGCTGTC GGTGACCGGC ACTTCGGCCT GA
 
Protein sequence
MPDTEGSSLL DPIADVAEEA GDETRFGLPE AVRAHLGTLL GRTYDRIGQD ADGATNPFAD 
LLARLEIALA QAEGERDKTF RAGLLEVVPA LHRFAVSLTR DPAAADDLVQ DTLLRGWRGR
GGFTPGTNLE AWLFTILRNV FYSQHRKQGR EVADTDGNYA ERLTSIPEQG GHLDLQDVRA
ALDRLAPVMR EALVLVAIEN LSYEEAAVVM NCRIGTVKSR VWRAREQLAR MLGYGGDEIG
SDGVMLSVTG TSA