Gene Mrad2831_1037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMrad2831_1037 
Symbol 
ID6137054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethylobacterium radiotolerans JCM 2831 
KingdomBacteria 
Replicon accessionNC_010505 
Strand
Start bp1089955 
End bp1091631 
Gene Length1677 bp 
Protein Length558 aa 
Translation table11 
GC content66% 
IMG OID641626746 
Productcytochrome c oxidase, subunit I 
Protein accessionYP_001753729 
Protein GI170747469 
COG category[C] Energy production and conversion 
COG ID[COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 
TIGRFAM ID[TIGR02891] cytochrome c oxidase, subunit I 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.107378 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCAT CGGGCAGCAT CGGCGGCACC GCCCGCCGGG AACCCCACGC CCCGGAATCC 
ACGATCGGGC GCAAGGCCGA CTACCTGCAC GCGGAATCGA CTCTGCGCTC GTGGTTCCTC
ACCACCGACC ACAAGCGCAT CGCGCTCCTC TATCTCGCCT CGATCACCGG CTTCTTCGTG
ATCGGCGCCC TGGCGGCCGG CGTGGTGCGC CTCGCGCTGA TCGTGCCCAA TGGCGCGATC
ATGACCAACG ACACCTACAA CAAGGCCTTC ACCATCCACG GGGTGGTGAT GGTCTGGTTC
TTCCTGATCC CGTCGATCCC CGCGACCTTC GGCAACTTCC TGATCCCCTT GATGATCGGG
GCCAGGGACC TCGCCTTCCC GAAGCTCAAC CTGACGAGCT GGTACGTGTT CATGGCGGGC
GCCCTGTTCA CCCTGGTCTC GGTGGTGCTG GGCGGCGTCG ATACCGGCTG GACCTTCTAC
GCCCCGCTCT CGACGGCCTT CTCGAACACC TGGGTGCTGC CGGCGCTGAT CGGCGTGACA
ATCGTGGGCT TCTCGTCGAT CCTGACGGGG CTCAACTTCG TGGTCACGAT CCACACCATG
CGGGCGCCCG GCATGACGTG GTTCAAGCTG CCGATCTTCG TCTGGGCGCA CTACGCCACG
AGCCTGATCT TCCTGCTGGC GACGCCCGTC ATCACCACCG CGCTGATCCT GCTGATCGCG
GAGCGCGCCT TCCACATCGG CGTGTTCGAC CCGGCCTATG GCGGCGATCC GGTGCTGTTC
CAGCACCTGT TCTGGTTCTA CTCGCACCCG GCCGTGTACA TCATGGTCCT GCCCGGCATG
GGGGTGATCT CCGAGATCGT CCCGGCCTTC GCGCAGAAGA AGCTGTTCGG CTACCGCTTC
GTCGCCTACG CGTCGATCGG GCTGGCCTCC GTGACCTTCT TCGTCTGGGG CCACCACATG
TTCGTCAACG GCCAGAGCGA CCTGGCCTCG CTGGTCTTCT CCGCCCTGTC CTTCGCGGTG
GCGGTGCCCT CGGCCGTGAA GGTCTACAAC TGGACCGCCA CGATCCATAA GGGAGCCCTG
CGGCTCGACA CGCCGATGCT CTACGCGATG GGCTATATCG GCCTGTTCGT GCTCGGCGGC
CTCACCGGCC TCTACCTCGC GACGCTCGCC ATCAACCAGC ACATCCACGC GACCTACTTC
GTGGTCGCGC ATTTCCACTA CATCATGGTC GGCGGCACGG TGCTGGCCTT CCTCGGCGGG
CTGCACTTCT GGTGGCCGAA ATTCACCGGC CGGATGTACA GCGAGCCCTG GGGCCGGGTC
TCGGCGCTGC TGATCTTCCT CGGCTTCAAC GTGACCTTCT TCCCGCAATT CATCCTGGGC
TATCTCGGGA TGCCGCGGCG CTACGCGACC TACCCGGCCG AGTTCCAGCT CCTGAACGTT
CTGTCCTCGG CGGGCGCCAC GATCCTGGCG GCGGGCTACC TCTTCCCGAT GCTCTACCTC
GTCTATTCCC TGTGGTTCGG GCGGAAGGCG CCCGCCAATC CGTGGAACGC GAAGGGGCTC
GAGTGGGAGA CCGCCTCCCC GCCGCCGACG CACAATTTCC TGTCGCCGCC GGAGGTGCCG
CGCATCCCCT ACGACTACCC GATCCAGGCC CAGGAATCCC GGGACCAGCA CGGATGA
 
Protein sequence
MSASGSIGGT ARREPHAPES TIGRKADYLH AESTLRSWFL TTDHKRIALL YLASITGFFV 
IGALAAGVVR LALIVPNGAI MTNDTYNKAF TIHGVVMVWF FLIPSIPATF GNFLIPLMIG
ARDLAFPKLN LTSWYVFMAG ALFTLVSVVL GGVDTGWTFY APLSTAFSNT WVLPALIGVT
IVGFSSILTG LNFVVTIHTM RAPGMTWFKL PIFVWAHYAT SLIFLLATPV ITTALILLIA
ERAFHIGVFD PAYGGDPVLF QHLFWFYSHP AVYIMVLPGM GVISEIVPAF AQKKLFGYRF
VAYASIGLAS VTFFVWGHHM FVNGQSDLAS LVFSALSFAV AVPSAVKVYN WTATIHKGAL
RLDTPMLYAM GYIGLFVLGG LTGLYLATLA INQHIHATYF VVAHFHYIMV GGTVLAFLGG
LHFWWPKFTG RMYSEPWGRV SALLIFLGFN VTFFPQFILG YLGMPRRYAT YPAEFQLLNV
LSSAGATILA AGYLFPMLYL VYSLWFGRKA PANPWNAKGL EWETASPPPT HNFLSPPEVP
RIPYDYPIQA QESRDQHG