| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_1033 |
|---|
| Symbol | |
|---|
| ID | 6137050 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | - |
|---|
| Start bp | 1087218 |
|---|
| End bp | 1087958 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641626742 |
|---|
| Product | ECF subfamily RNA polymerase sigma-24 factor |
|---|
| Protein accession | YP_001753725 |
|---|
| Protein GI | 170747465 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.0490055 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGCG ACGACACCGA CACCGTCCTG TCCCAGGAGG ACGGGACTCG GGATGGCCGC
CCGAACCTGG CGCCCGGCAT CCGCACGCAT CTCGGTGAGC ACCTGCGCAC GGTCTACGAG
CGGATCGGCG AGGAGACGAT GCCGTCCCGC TTCGCCGAGC TGATCGAGAA GCTCGAGGCG
GCCCTGCGTG CCCGCGGCGA GGCGATCGAG CCGGAATTCC GCAACGGTCT GCTCGCGGCC
GTGCCGTCGC TGCGCGCCTT CGCGCTGTCG CTGACCTCGA ACCCGGCCCG CTCGGACGAC
CTCGTGCAGG ACACCCTGCT GAAGGGCTGG CAGCACCGCG CGCGCTTCCA GCCGGGCACC
AACCTGAACG CGTGGCTGTT CACGATCCTG CGCAACATCT TCTACTCGGA CCATCGCAAG
CGGGTCCGCG AGGTCGAGGA TCAGGACGGA TCCTACGCGG CCCGGCTCGC CACCGCCCCG
CACCAGGGCG ACCGGCTCGA CGTCGAGGAC CTGCAATCGG CGCTCGCGAA GCTGCCGCCG
GACCAGCGCG AGGCGCTGGT GCTGGTCGGT GCCGAGGGCG TCTCCTACGA GGAGGCCGCG
ACCATCATGG GCTGCAAGGT CGGCACCGTG AAGAGCCGCG TCAGCCGCGC CCGCGGCCGA
CTCGCCGAGC TCCTGGGCTA CGACGAGGAG GACCTCGGCT CCGACCGGTT CATCCAGTCG
GCGATGCCGA AGGACGCGTA G
|
|---|
| Protein sequence | MTRDDTDTVL SQEDGTRDGR PNLAPGIRTH LGEHLRTVYE RIGEETMPSR FAELIEKLEA
ALRARGEAIE PEFRNGLLAA VPSLRAFALS LTSNPARSDD LVQDTLLKGW QHRARFQPGT
NLNAWLFTIL RNIFYSDHRK RVREVEDQDG SYAARLATAP HQGDRLDVED LQSALAKLPP
DQREALVLVG AEGVSYEEAA TIMGCKVGTV KSRVSRARGR LAELLGYDEE DLGSDRFIQS
AMPKDA
|
|---|
| |