Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrad2831_0863 |
Symbol | |
ID | 6136879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium radiotolerans JCM 2831 |
Kingdom | Bacteria |
Replicon accession | NC_010505 |
Strand | - |
Start bp | 906523 |
End bp | 907149 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641626572 |
Product | transcriptional regulator, TrmB |
Protein accession | YP_001753556 |
Protein GI | 170747296 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0029609 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | GTGCAGATTC AGGATCGTCC GGCGGCCGCC GGCACTAATT CGGGCGCTCC GGTGGGCGAC AAGCAGAAGC GCGATCATCG GGACGAGGCG GCCGCCGTGC TCGGCCTCCC GTCGAAGAAG CTGAGGCCAC CCGGCGTGCG CAGCGTCGGC TGGGCCCTGG TCCAGGCGGC GCGCCTGCAC CGGGCGCGGA CCGGCGACCG CTTAGCCAAG CTCGGCCTGT TCGCCGGTCA GGAACAGGTG GTGCAGGCGC TGGCCGCGGC CGGCACGATG ACGATGGGCG ATCTCGCCGC CCTGCTGCGC GTCCGACCGC CCACCGCCTC CAAGACCGTC ACGCGGCTCG CCGCCCTCGG CATTGTCGAG CGCCGGGCCG AATCGGGCGA CGGCCGCGTG GTCCGGGTCC AGCTCACGGA GGCCGGCATG GCCAAGGCCG AGGCCATCGA GCGGATCCAG GAGGAGGTCG AGGCCGAGCT GCTCGACCAC CTCGACAAGA CCGATCGCCG CCGCCTCCGG AAGCTTCTGC GGAAGGCGGC CCGCGGCCTC GCCGAGGCGG CCGGCGCCTC CGGTCAGACG ACCGAGGCAG ACGCCGAGAT CGAAGCCGAG GACGAGGCCG AGGCGCTGGC GACCTGA
|
Protein sequence | MQIQDRPAAA GTNSGAPVGD KQKRDHRDEA AAVLGLPSKK LRPPGVRSVG WALVQAARLH RARTGDRLAK LGLFAGQEQV VQALAAAGTM TMGDLAALLR VRPPTASKTV TRLAALGIVE RRAESGDGRV VRVQLTEAGM AKAEAIERIQ EEVEAELLDH LDKTDRRRLR KLLRKAARGL AEAAGASGQT TEADAEIEAE DEAEALAT
|
| |