Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mrad2831_0861 |
Symbol | |
ID | 6136877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methylobacterium radiotolerans JCM 2831 |
Kingdom | Bacteria |
Replicon accession | NC_010505 |
Strand | - |
Start bp | 902963 |
End bp | 905107 |
Gene Length | 2145 bp |
Protein Length | 714 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641626570 |
Product | TonB-dependent receptor plug |
Protein accession | YP_001753554 |
Protein GI | 170747294 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00113091 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCTCCCT CGCGCCGCTT CGGCTTCCTC GCCAGCACGG TCCTGTCCTC GACTGTCTGC GCCGGCCTCC TGACACCGTC CGCCTTGCGG GCGCAGCAGG CCGTCGCCCT CGACGAGATC AGCGTCACCA GTCCGAGCCC GATCCAGCCG TCGCGCGGCG CGGTCGCGGC GGACGCGGCG GTGCCGATCG GCGTCCTTCC GGTGGCGACC AACACGTTCT CACCGGTGAC GGTGGTGACC CAGGATCAGA TCGCGCGCGA TCAGCCCCGG ACCCTGGGCG ACGCCCTGTT CGACAGGCCG GGCATCTCGG GCACGACCTA CGCGCCGGGG GCGGCGTCCC GGCCGATCAT CCGCGGCCTC GACAATGCCC GGGTGCGGAT CCAGGAGAAC GGCATCGTCA ACGGCGGCGT GTCCGACCTC GGCGAGGACC ACGCCGTGCC GGTCAACCCG CTGGTCGCCG ACCGGATCGA GGTGATCCGC GGCCCCGCGA CCCTGCGCTA CGGCTCGGGG GCCATCGGCG GCGTCGTCTC GGCCGACAAC AACCGGGTGC CGACCTTCAT CCCGGCGAAC GGGGTGCAGG GCCAGGTCAC CAGCGGCTTC TCCAGCGTGG ATAACGGCCG GCTCGGTGCC GCCACGGTGG ATGCCGGCGG CGACGGCATC GCGGTCCATG CCGACGGCTT CAAGACCGCG AACGACAGCT ACGCGATCCC CGGCGGGATC CAGCGCAATT CCTACAACGA GTCGCAGGGC GGCGCGGTCG GCATCTCGGC GATCGGCGAC CGCGGGTTCG TGGGCATCTC CTTCAGCCAC TACGACGCGG TCTACGCGAT CCCCGGCGGC GTTGCCGAGC AGGACCGGAC CCGCCTGACC CCCAACCAGG ACCGCGTCCT GTCGCGGGGC GAGTACCGCC CGCTCGACGG ACCCTTCGAG GTGATCCGCT ACTGGGCGGG CTACTCGGTC TACCGCCACA ACGAGGTCGG GATCGGCGAC GACGGGATCG AGGGCGTCCA GGCGATCTTC AAGAACCGCG AGGCCGAGGG CCGCTTGGAG CTCCAGCACG TCCCGGTCTT CACCGAGTTC GGCAAGCTCA CGGGCGCGCT CGGCTTCCAG TCGGATCGGC GCGTGATCAA CACGCAGCTC GAATCGTTCC TGCCGAAGAC GGAATCCCGC GCGAACGCGG TCTACCTGTT CGAGGAGCTG GAGCTGCAGC CGGGCACGCG GCTGCAGGCG GCCGGGCGCT ACGAGGTCGA CCGGCTGTCG AGCACGGCGG CGCAGTTCCC CGCCGACTAC GTGCCGATCG ACGGGCAGGA GCCGTTCCAG TACGCGCGGA CCCGGCGCTT CGCCCCGAAG AGCGCCAGCA TCGGCGCCCT GCAGGACCTG CCCTACGGCT TCGTGGCGAG CCTCACCGGC TCCTACGTCG AGCGCGGGCC CACGGGCTAC GAGCTGTTCT CGCAGGGCCC GCACGACGCC ACCGCGACCT TCGAGATCGG CAACCCGAAC CTCAAGAAGG AGCGCGCCCG GACCATCGAG GCCAGCATCC GGCGGGCCGA GGGGCCGTTC CGCCTCGACG CCACCGGCTA CTTCACCCGC TACACCGGCT TCATCTACCG CAACTACACA GGCCTGACCT GCGACGACGA CTTCGCGTCC TGCGGCACCG GCACCGACAA CCGGCAGATC GTCTACCAGC AGCAGAACGC GACCTTCTAC GGCGCCGAGA TCATCGGCCA GTACGACCTC GTGCCGGTGG GCAACGGCTT CGCCGGCGTC GAGGCGCAGT TCGACTTCGT CCGCGCCCAG TTCGACAACG GCACCAACGT GCCGCGCATC CCGCCCTACC GGCTCGGCGG CGGCGTCTAC CTGCGGGCCG ACGGGTGGTT CGCGCGGGTG AACCTGCTCC ACGCCTTCAG CCACGACGCC ACGGCCGTGT ACGAGACGCC GACCCCCGGC TACGACGACC TGCGCGCCGA GCTGAGCTAC ACCAAGGCCG TCGATCCCGC GGTCTACGGG GCGAGCGCGA TCACCCTCGG CGTCCAGGGC CGCAACCTGC TGAACGACGA CATCCGCAAT TCGACCTCGT TCAAGAAGGA CGAGATCCTG CTGCCGGGAC GGAACGTGCG CCTGTTCCTG ACGGCGCGGT TCTGA
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Protein sequence | MPPSRRFGFL ASTVLSSTVC AGLLTPSALR AQQAVALDEI SVTSPSPIQP SRGAVAADAA VPIGVLPVAT NTFSPVTVVT QDQIARDQPR TLGDALFDRP GISGTTYAPG AASRPIIRGL DNARVRIQEN GIVNGGVSDL GEDHAVPVNP LVADRIEVIR GPATLRYGSG AIGGVVSADN NRVPTFIPAN GVQGQVTSGF SSVDNGRLGA ATVDAGGDGI AVHADGFKTA NDSYAIPGGI QRNSYNESQG GAVGISAIGD RGFVGISFSH YDAVYAIPGG VAEQDRTRLT PNQDRVLSRG EYRPLDGPFE VIRYWAGYSV YRHNEVGIGD DGIEGVQAIF KNREAEGRLE LQHVPVFTEF GKLTGALGFQ SDRRVINTQL ESFLPKTESR ANAVYLFEEL ELQPGTRLQA AGRYEVDRLS STAAQFPADY VPIDGQEPFQ YARTRRFAPK SASIGALQDL PYGFVASLTG SYVERGPTGY ELFSQGPHDA TATFEIGNPN LKKERARTIE ASIRRAEGPF RLDATGYFTR YTGFIYRNYT GLTCDDDFAS CGTGTDNRQI VYQQQNATFY GAEIIGQYDL VPVGNGFAGV EAQFDFVRAQ FDNGTNVPRI PPYRLGGGVY LRADGWFARV NLLHAFSHDA TAVYETPTPG YDDLRAELSY TKAVDPAVYG ASAITLGVQG RNLLNDDIRN STSFKKDEIL LPGRNVRLFL TARF
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