| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_0508 |
|---|
| Symbol | |
|---|
| ID | 6136521 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | + |
|---|
| Start bp | 546566 |
|---|
| End bp | 548371 |
|---|
| Gene Length | 1806 bp |
|---|
| Protein Length | 601 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641626215 |
|---|
| Product | methanol/ethanol family PQQ-dependent dehydrogenase |
|---|
| Protein accession | YP_001753202 |
|---|
| Protein GI | 170746942 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG4993] Glucose dehydrogenase |
|---|
| TIGRFAM ID | [TIGR03075] PQQ-dependent dehydrogenase, methanol/ethanol family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.619983 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGAGCGG TACATCTCCT TGCGCTCGGC GCAGGTGTCG CGGCCGTCGC CGCGCCGGCG
CTGGCCAATG AAAGCGTCAT GAAGGGCATC GCCAACCCGG CGGAACAGGT TCTTCAGACG
GTGGATTACG CGAATACGCG TTACTCGAAG CTCGACCAGA TCAACGCCAA GAACGTCAAG
GACCTGCAGG TCGCCTGGAC GTTCTCGACC GGCGTGCTGC GCGGCCACGA GGGCTCGCCG
CTCGTCGTCG GCAACGTGAT GTACGTGCAC ACGCCGTTCC CGAACATCGT GTACGCCCTC
GACCTCGACC ACGAGGCGAA GATCCTCTGG AAGTACGAGC CGAAGCAGGA TCCGTCCGTG
ATCCCGGTCA TGTGCTGTGA CACGGTCAAT CGTGGCCTGG CCTACGCCGA CGGCGCCATC
CTCCTGCATC AGGCCGACAC CACCCTCGTG TCGCTCGACG CCAAGACCGG CAAGGTCAAC
TGGTCGGTCG TGAACGGCGA CCCGAAGAAG GGCGAGACCA ACACCGCGAC GGTTCTGCCG
GTCAAGGACA AGGTCATCGT CGGCATCTCG GGCGGCGAGT TCGGCGTGCA GTGCCACGTC
ACCGCCTACG ACCTGAAGAC CGGCAAGAAG GTGTGGCGCG GCTACTCCGA GGGCCCGGAC
GATCAGCTGA TCGTCGACCC GGAGAAGACC ACCTCGCTCG GCAAGCCGAT CGGCAAGGAC
TCCTCGCTGA AGACCTGGGA AGGCGATCAG TGGAAGACCG GCGGCGGCTG CACCTGGGGC
TGGTTCTCGT ACGACCCCAA GCTCGACCTG ATGTACTACG GCTCGGGCAA CCCCTCGACC
TGGAACCCCA AGCAGCGTCC GGGCGACAAC AAGTGGTCCA TGACCATCTG GGCGCGTAAC
CCGGACACCG GCATGGCCAA GTGGGTCTAC CAGATGACCC CCCACGACGA GTGGGACTAT
GACGGCATCA ACGAGATGAT CCTCACGGAT CAGAAGATCG ACGGCAAGGA GCAGCCGCTC
CTGACGCACT TCGACCGTAA CGGCTTCGGC TACACGCTGA ACCGCGCCAC GGGCGAACTG
CTGGTCGCCG AGAAGTTCGA CCCGGCCGTC AACTGGGCGA CCAAGGTCGA CATGGACAAG
GGCTCGAAGA ACTACGGCCG TCCGCTGGTC GTGTCGAAGT ACTCGACCGA GCAGAACGGT
GAGGACACCA ACTCCAAGGG CATCTGCCCG GCGGCGCTGG GCACCAAGGA TCAGCAGCCT
GCGGCCTTCT CGCCGAAGAC CAACCTGTTC TACGTGCCCA CCAACCACGT CTGCATGGAC
TACGAGCCGT TCCGGGTGAC CTACACCCCG GGCCAGCCCT ACGTCGGTGC GACCCTCTCG
ATGTACCCGG CCCCGAACTC GCACGGCGGC ATGGGCAACT TCATCGCGTG GGACGGCGTC
AACGGCAAGA TCAAGTGGTC CAACCCCGAG CAGTTCTCGG TGTGGTCCGG TGCTCTGGCC
ACCGCTGGCG ACGTCGTGTT CTACGGCACG CTTGAGGGCT ACCTGAAGGC GGTCGACGAC
AAGACCGGCA AGGAGCTGTT CAAGTTCAAG ACCCCGTCGG GCATCATCGG CAACGTGATG
ACCTACCAGC ACAAGGGCAA GCAGTACGTG GGCGTCCTGT CGGGCGTCGG CGGCTGGGCC
GGCATCGGCC TCGCGGCCGG CCTGACCGAC CCGAATGCCG GTCTCGGCGC GGTGGGCGGC
TACGCGGCTC TGTCGCAGTA CACCAACCTC GGCGGTCAGC TGACGGTCTT CGCCCTGCCG
AACTAA
|
|---|
| Protein sequence | MRAVHLLALG AGVAAVAAPA LANESVMKGI ANPAEQVLQT VDYANTRYSK LDQINAKNVK
DLQVAWTFST GVLRGHEGSP LVVGNVMYVH TPFPNIVYAL DLDHEAKILW KYEPKQDPSV
IPVMCCDTVN RGLAYADGAI LLHQADTTLV SLDAKTGKVN WSVVNGDPKK GETNTATVLP
VKDKVIVGIS GGEFGVQCHV TAYDLKTGKK VWRGYSEGPD DQLIVDPEKT TSLGKPIGKD
SSLKTWEGDQ WKTGGGCTWG WFSYDPKLDL MYYGSGNPST WNPKQRPGDN KWSMTIWARN
PDTGMAKWVY QMTPHDEWDY DGINEMILTD QKIDGKEQPL LTHFDRNGFG YTLNRATGEL
LVAEKFDPAV NWATKVDMDK GSKNYGRPLV VSKYSTEQNG EDTNSKGICP AALGTKDQQP
AAFSPKTNLF YVPTNHVCMD YEPFRVTYTP GQPYVGATLS MYPAPNSHGG MGNFIAWDGV
NGKIKWSNPE QFSVWSGALA TAGDVVFYGT LEGYLKAVDD KTGKELFKFK TPSGIIGNVM
TYQHKGKQYV GVLSGVGGWA GIGLAAGLTD PNAGLGAVGG YAALSQYTNL GGQLTVFALP
N
|
|---|
| |