| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_0506 |
|---|
| Symbol | |
|---|
| ID | 6136519 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | + |
|---|
| Start bp | 544277 |
|---|
| End bp | 545464 |
|---|
| Gene Length | 1188 bp |
|---|
| Protein Length | 395 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641626213 |
|---|
| Product | ribonuclease D |
|---|
| Protein accession | YP_001753200 |
|---|
| Protein GI | 170746940 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0349] Ribonuclease D |
|---|
| TIGRFAM ID | [TIGR01388] ribonuclease D |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.967739 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCTGA TCACCACCAC TGACGCGCTG CGCCAGATCT GCACACGTCT CGCCGAGCAG
CCCTTCGTGA CCGTCGACAC GGAGTTCATG CGTGAGACGA CGTATTATCC GAAACTGTGC
CTGATCCAGA TGGCGGCACC GGACGGGACC GCCGTCCTGG TCGACCCGCT GGCGCCCGGG
ATCGACCTGG ATCCGTTCAT CGCGCTCATG GCCGACGAGC GCACCGTCAA GGTGTTCCAT
TCCGCCCGTC AGGACCTGGA GATCATCTGG CTGATCGGCG GGATCCTGCC GCACCCGTTC
TTCGACACGC AGGTCGCCGC CATGGTCTGC GGCTACGGCG ACTCCGTCTC GTACGAGCAG
CTCGTCAACG ACGTCGCCAA GGCCAAGATC GACAAGTCGT CCCGCTTCAC CGACTGGTCG
CGGCGGCCGC TGTCGGAGGC GCAGCTGACC TACGCGCTGT CCGACGTCAC CCACTTGGTG
AAGATCTACG AGGTCCTCGT CGCCGAGTTG CTGCGGACAG ACCGCGGGGC CTGGCTCGAC
GAGGAGATGG CGGTGCTGAC CTCGCCGGAG ACCTACCGCG CCGATCCCGC CCAGGCGTGG
CGCCGCCTCT CCGGCCGGAT GCGCAAGCCG CGCGAGATCG CCGTGCTGAT GGAGGTGGCG
GCTTGGCGCG AGAGCGAGGC GCAGACGCGC AACGTCCCGC GCGGGCGCGT CCTGAAGGAT
GAGGCGGTCA TCGACATCGC GTCGGCGGCG CCGCGGAGCG CCGAGGCGCT CGGGCGCCTG
CGGACGATCC CGGCGGGCTT CGAGCGGTCC CGGACGGGGG CCGACATCGT CGCCGCCGTC
GAGCGCGGCC TCGCCCGCGA CACCAGCGCT GTCCGGATGC CCGAGCGCGT GCGGCGGAGC
GGCGGCAACG GCGCGATCGT CGAGCTGCTG AAGGTCCTGC TGAAGGCGGT CTGCGAGGCC
GAGGGCGTCG CGCCCAAGAT CATCGCCACG GTCGACGACC TGGAAGCCGT CGCTGACGAC
GATGCCGCCG AGGTACCGGC GCTGCAGGGG TGGCGTCGGA CGCTGTTCGG GGAGAAGGCG
CTGGCGCTGA AGCAGGGCCG GCTGGCGCTG TCGGTCGAGT CGGGCCGGAT CGTGGTCCGC
CCTCTCGAGG CCGAGCCCGC GGCCGCCGGC GCCGACGCGA ACGGATGA
|
|---|
| Protein sequence | MDLITTTDAL RQICTRLAEQ PFVTVDTEFM RETTYYPKLC LIQMAAPDGT AVLVDPLAPG
IDLDPFIALM ADERTVKVFH SARQDLEIIW LIGGILPHPF FDTQVAAMVC GYGDSVSYEQ
LVNDVAKAKI DKSSRFTDWS RRPLSEAQLT YALSDVTHLV KIYEVLVAEL LRTDRGAWLD
EEMAVLTSPE TYRADPAQAW RRLSGRMRKP REIAVLMEVA AWRESEAQTR NVPRGRVLKD
EAVIDIASAA PRSAEALGRL RTIPAGFERS RTGADIVAAV ERGLARDTSA VRMPERVRRS
GGNGAIVELL KVLLKAVCEA EGVAPKIIAT VDDLEAVADD DAAEVPALQG WRRTLFGEKA
LALKQGRLAL SVESGRIVVR PLEAEPAAAG ADANG
|
|---|
| |