| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_0482 |
|---|
| Symbol | |
|---|
| ID | 6136495 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | - |
|---|
| Start bp | 517420 |
|---|
| End bp | 518475 |
|---|
| Gene Length | 1056 bp |
|---|
| Protein Length | 351 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 641626189 |
|---|
| Product | RND family efflux transporter MFP subunit |
|---|
| Protein accession | YP_001753176 |
|---|
| Protein GI | 170746916 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1566] Multidrug resistance efflux pump |
|---|
| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.371708 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCGACA CGACCGCCGA CGAGGACGAT CCGAAGTCCG CCTCCCGTGA CAGCGCCCCC
GGGCGGAGCG ACCCGCTGCC CGCGGTGCCG CGCCGGGGCC GCGCCGCCAA GGTGTTCCGC
CTCGCGGCCA CGGGCGCGAT CCTGCTGGCG GCGATCGTCG CGGCGGCCTT CGTGTGGGAA
TTCTACGTGG CGGCGCCCTG GACGCGCGAC GGCACGGTCC GGGTGCAGGT CGCCAACATC
GCGCCCCAGG TCGCCGGGCA GATCGTCGAG GTCCGGGTTC AGGACAACCA GACCGTCCGC
AAGGGCGACG TCCTCTACGT CATCGATCCG GTCGACTTCG AGGTCGCGGT CACCTCGGCG
GACGCCGAGG TGAAGAACCG CGAGGCCGAC CTGCAGGTGA AGAACGCCCA GTCAGCCCGC
CGGCAGGCGC TCACGACCGT GTCGACCTCG ATCGAGGAGA AGCAGCAATT CGCCGGCGCC
GCGAAGATCG CCGAGGCGTC GCTGGAGAGT GCCCAGGCGC AATTGCGGCA GGCCAAGGTG
AACCTCGAGC GCACCCAGGT GAAGTCCACC GTCAACGGCC GGGTGACCAA CCTGCTGATG
CGCGTCGGCG ACTACGCCCG GACCGGCACC TCGAACATCA GCGTAATCGA CACCGATTCC
TTCTGGATCG ACGGCTATTT CGAGGAGACG AAGATGCCCA ACATTCACGT CGGCGATCGC
GCCGACGTGA AGCTGATGGG CTTCGACCCG CACCTGACCG GCACGGTCCA CAGCATCACG
CTCGGCATCT CCACGGCGAA CGCCGCCGCC AGCACGCAGG GATTGCCGGA CGTAAACCCG
GTCTACACCT GGGTCCGCCT CGCTCAGCGG GTGCCGGTCC GCATCCGCAT CGACCATGTC
CCGGCGGGCG TCCCGCTCAT CGCCGGCATG ACCGCGACGG TGTTCGTCAA TGGTGGCCGC
GGCCCGGCGC CGAACTGGTT CATGAACTTG CGCGACCGCG TCTCCGCTCT GACCACGCCG
GCGGCCGGGC CGGCCCAGGA GGCCGAGCGG CGCTGA
|
|---|
| Protein sequence | MPDTTADEDD PKSASRDSAP GRSDPLPAVP RRGRAAKVFR LAATGAILLA AIVAAAFVWE
FYVAAPWTRD GTVRVQVANI APQVAGQIVE VRVQDNQTVR KGDVLYVIDP VDFEVAVTSA
DAEVKNREAD LQVKNAQSAR RQALTTVSTS IEEKQQFAGA AKIAEASLES AQAQLRQAKV
NLERTQVKST VNGRVTNLLM RVGDYARTGT SNISVIDTDS FWIDGYFEET KMPNIHVGDR
ADVKLMGFDP HLTGTVHSIT LGISTANAAA STQGLPDVNP VYTWVRLAQR VPVRIRIDHV
PAGVPLIAGM TATVFVNGGR GPAPNWFMNL RDRVSALTTP AAGPAQEAER R
|
|---|
| |