| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_0479 |
|---|
| Symbol | gatA |
|---|
| ID | 6136492 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | + |
|---|
| Start bp | 513123 |
|---|
| End bp | 514601 |
|---|
| Gene Length | 1479 bp |
|---|
| Protein Length | 492 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 641626186 |
|---|
| Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
|---|
| Protein accession | YP_001753173 |
|---|
| Protein GI | 170746913 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
|---|
| TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.475209 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.289716 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGATCCGA ACGAACTTAC CCTGGCCGAA GCGCGCGACG CCCTCAAGGC GAAGCGGATC
TCGGCCCGCG AGCTGACCCA GGCGCATCTC GACGCCATGG CGCAGGCCCG GGTCCTGAAC
GCGTATATCC GGGAGACCCC GGACCGGGCC CTGACGATGG CCGAGGCCTC CGACCGGAAG
ATCGCGTCCG GCGAGGCGCG GCCGCTCGAG GGCATTCCCC TCGGCATCAA GGACCTGTTC
TGCACGCACG GCGTGACGAC CACGGCGGGG TCCAAGATCC TCGAGACCTT CGAGCCGCAC
TACGAATCGG CCGTGTCCGC CAATCTGTGG CGCGACGGCG CCGTGATGCT CGGCAAACTG
AACCTCGACG AGTTCGCCAT GGGCTCGTCC AACGAGACCA GCGCCTACGG CAACGTGATC
TCGCCCTGGC GGCGCGCGGG ATCGGACGCA CCGATCGTGC CCGGCGGCTC CTCCGGCGGC
TCCGCCGCGG CGGTCGCCGC GCGGCTCTGC CTCGGCGCCA CCGCGACCGA TACCGGTGGC
TCCATCCGGC AGCCCGCCGC CTTCACGGGC ACTGTGGGGA TCAAGCCGAC CTACGGGCGC
TGCTCGCGCT GGGGCACGGT GGCCTTCGCC TCCTCCCTCG ACCAAGCGGG CCCGATCGCC
CGGACGGTGC GCGACTGCGC CATCCTCCTC GGATCCATGG CGGGCTCCGA TGCCCGGGAC
ACGACGTGCG CCGACCTCGC GGTACCCGAT TTCGAGGCCG CGGTGTCGCG GGGCGTGAAG
GGCCTGACCA TCGGCATCCC CAAGGAATAC CGGGTCGACG GGATGCCCGC CGAGATCCAG
AAGCTCTGGG ACGAGGGGGC TGCGTGGCTG AAGGCGGCCG GCGCGACGAT CAAGGAGATC
TCGCTGCCGC ACACCTCCTA CGCGCTGCCG GCCTACTACA TCGTGGCCCC GGCCGAGGCC
TCCTCGAACC TCGCCCGCTA CGACGGCGTC CGCTACGGCC TGCGCGTGCC CGGCAAGGAC
ATCGCCGGGA TGTACGAGAA CACCCGCGCC GCCGGCTTCG GCCGCGAGGT GAAGCGGCGG
ATCATGATCG GCACCTACGT GCTCTCGGCC GGCTACTACG ACGCCTACTA TGTCCGCGCG
CAGAAGATCC GCACGCTGAT CAAGCGCGAC TTCGAGGCCG CCTACGCGTC CGGCGTCGAC
GCGATCCTGA CGCCGGCGAC GCCGTCGGCC GCTTTCGGCA TCGGCGAGAA GGCCTCGGCC
GACCCGGTGG AGATGTACCT CAACGACGTG TTCACCGTGA CGGTGAACAT GGCCGGGCTT
CCCGGCATCG CCGTGCCGGC CGGCCTCGAC GGACAGGGCC TGCCGCTGGG CCTGCAACTC
ATCGGCCGGC CCTTCGATGA GGAGACGCTG TTCGCGGTCG CGCAGGTGAT CGAGGACTCC
GCCGGCCGGA CGGTCCTTCC CGAGCCGTGG TGGTCATGA
|
|---|
| Protein sequence | MDPNELTLAE ARDALKAKRI SARELTQAHL DAMAQARVLN AYIRETPDRA LTMAEASDRK
IASGEARPLE GIPLGIKDLF CTHGVTTTAG SKILETFEPH YESAVSANLW RDGAVMLGKL
NLDEFAMGSS NETSAYGNVI SPWRRAGSDA PIVPGGSSGG SAAAVAARLC LGATATDTGG
SIRQPAAFTG TVGIKPTYGR CSRWGTVAFA SSLDQAGPIA RTVRDCAILL GSMAGSDARD
TTCADLAVPD FEAAVSRGVK GLTIGIPKEY RVDGMPAEIQ KLWDEGAAWL KAAGATIKEI
SLPHTSYALP AYYIVAPAEA SSNLARYDGV RYGLRVPGKD IAGMYENTRA AGFGREVKRR
IMIGTYVLSA GYYDAYYVRA QKIRTLIKRD FEAAYASGVD AILTPATPSA AFGIGEKASA
DPVEMYLNDV FTVTVNMAGL PGIAVPAGLD GQGLPLGLQL IGRPFDEETL FAVAQVIEDS
AGRTVLPEPW WS
|
|---|
| |