| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mrad2831_0039 |
|---|
| Symbol | |
|---|
| ID | 6136338 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methylobacterium radiotolerans JCM 2831 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010505 |
|---|
| Strand | - |
|---|
| Start bp | 45919 |
|---|
| End bp | 47109 |
|---|
| Gene Length | 1191 bp |
|---|
| Protein Length | 396 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641625760 |
|---|
| Product | lytic murein transglycosylase |
|---|
| Protein accession | YP_001752749 |
|---|
| Protein GI | 170746489 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
|---|
| TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.265426 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCTCCC GCCGATGGTT TCTGGCCGCG GCGGCGTCCC TCGCCACCGG GGAGGCCCGC
GCCGAGGACG CCTTCCGGGC GTTCATCGAG GCCCTGCGTC CGGACGCGGC GGCGCGGGGT
GTCACCGCGG CGACTTTCGA CGCGGCGTTT CGCGGGATCA CGGGACCCGA TGCCGGCATT
CTGGCGCGCA CCCGCCGCCA GAGCGAGTTC GTCCGGCCGG TCTGGGAGTA CCTCGTCGGC
GCGGTCTCGG CCGGCCGCAT CGCGCGCGGA CGCGCCCGTG CGGCGGCCCT CGCGTCGACC
CTGACGGCAA TCGAGGGCCG CTACGGCGTT CCGGGGCGGA TGGCGATGGC GTTCTGGGGC
GTCGAATCGG ACTTCGGAGC GAGCGCGGGC AGCGTTCCGA CGGTCCGGGC GCTGGCGACG
CTCGCCGAGG CGCGGCACCG CGGCGGCCTG TTCCGCGACG AGCTCCTGGC CGCGCTCACG
ATCCTGCAGC GCGGCGACAT CGCGCCGGAC CGGATGAGCG GCAGCTGGGC CGGCGCGATG
GGTCAGGTGC AGTTCCTGCC CTCAACCTAC CTGGCCCACG CGGTCGACTT CGACGGCGAC
GGACGCCGCG ACATCTGGAC CAGCGAGCCG GACTCGCTGG CATCGATCGC GGCCTACCTC
AAGGATCTCG GCTGGAATCC GGCGCTCTCT TGGGGCTACG AGGTGCTCCT GCCGAAGGAC
TTCGACCTGA ACCGCTACGC GGGCGATCTC GGCAGCTTCG CCGAGCGAGG CGTTCGCCGC
ACCGACGGGA AGCCGCTGCC GGGGACCGGA CGTGCCAGCC TGTTCCTGCC CGGTGGCCTG
GGGGCGCCGG TCTTCCTGAT CACCGACAAT TTCGAGGTGA TCCGAGGCTA CAACACCTCG
GATTCCTACG CGCTGGCGGT GGGACACCTC GCAGACCGAC TCGCCGGCGG TCCGCCGCTG
GCCGCGCCTT GGCCAGCCGC CGGCGCCCGC CTCGACGGGC CGGGCCTCCG CGCCCTGCAA
ACCGGCCTCG CGGCGGCCGG CTTCTACGAC GGGCCGACGG ATGGACGGGC CGGCCCGAAG
CTGCGCGAGG CGGTGCGGCG CTACCAGATC AGCGCCGGAT TGCCGGCCGA CGGCTACGCC
ACGCCGGCCC TGCTCGACCG CGTCACCGGC AAGGCGGCAC CGCGACGCTG A
|
|---|
| Protein sequence | MLSRRWFLAA AASLATGEAR AEDAFRAFIE ALRPDAAARG VTAATFDAAF RGITGPDAGI
LARTRRQSEF VRPVWEYLVG AVSAGRIARG RARAAALAST LTAIEGRYGV PGRMAMAFWG
VESDFGASAG SVPTVRALAT LAEARHRGGL FRDELLAALT ILQRGDIAPD RMSGSWAGAM
GQVQFLPSTY LAHAVDFDGD GRRDIWTSEP DSLASIAAYL KDLGWNPALS WGYEVLLPKD
FDLNRYAGDL GSFAERGVRR TDGKPLPGTG RASLFLPGGL GAPVFLITDN FEVIRGYNTS
DSYALAVGHL ADRLAGGPPL AAPWPAAGAR LDGPGLRALQ TGLAAAGFYD GPTDGRAGPK
LREAVRRYQI SAGLPADGYA TPALLDRVTG KAAPRR
|
|---|
| |