| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_5213 |
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| Symbol | |
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| ID | 6114215 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 5771657 |
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| End bp | 5773339 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 641625036 |
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| Product | putative inner membrane protein translocase component YidC |
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| Protein accession | YP_001752057 |
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| Protein GI | 170724369 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATATTA AACGCACGAT CCTGATCGCC GCCCTGGCAA TCGTGTCCTA CGTCATGGTC
CTGAAGTGGA ACGATGACTA CGGCCAGGCT GCCTTGCCGA CTCAGAATAC TGCTGCCAGC
ACTGTTGCTC CGGGCCTGCC CGATGGCGTA CCGGCCGCTA ACAACGGCGC CAGCGCCGAT
GTACCGAGCG CCAACGCCGA GTCGAGCCCT GCCGAACTGG CACCTGTTGC GCTCAGCAAG
GATCTCATCC GGGTCAAGAC CGATGTCCTG GAACTGGCTA TCGATCCAGT CGGCGGTGAC
ATCGTCCAGC TGAACCTGCC GAAGTACCCG CGTCGTCAGG ATCATCCGGA CATTCCGTTC
CAGCTGTTCG ACAACGGTGG CGAGCGCGTA TATCTGGCCC AGAGCGGCCT GACCGGTGCC
AACGGTCCGG ATGCGCGCTC CACCGGCCGT CCGCTGTACG CCGCAGAGCA GAAGTCCTTC
CAGCTGGCTG ATGGCCAGGA ACAACTGGTG GTCGACCTGA AGTTCAGCGA CAACGGTGTG
AACTACATCA AGCGCTTCAG CTTCAAGCGC GGTGAGTACG ACCTGTCCGT CAGCTACCTG
ATCGACAACC AGAGCGGCCA GGCCTGGAGC GGCAACATGT TTGCCCAGCT CAAGCGTGAC
GCCAGTGGTG ATCCGTCCTC GAGCACCGCC ACCGGTACCG CCACCTACTT GGGTGCTGCC
CTGTGGACAG CTGGCGAGCC GTACAAGAAA GTGTCGATGA AGGACATCGA CAAAGGTAGT
TTGAAAGAAA ATGTGTCTGG CGGCTGGGTT GCCTGGCTGC AGCACTACTT CGTAACAGCC
TGGATCCCTG CCAAGTCGGA CAACAACGTC GTTCAGACCC GCAAGGACAG CCAGGGCAAC
TACATCATCG GCTACACCGG CCCGGCCATC AGCGTACCGG CTGGCGGCAA GGCCGAAACC
AGCGCCATGC TGTACGCCGG CCCGAAGATC CAGTCCAAGC TCAAGGAACT GTCCCCAGGC
CTGGAACTGA CCGTCGATTA CGGCTTCCTG TGGTTCATCG CCCAGCCGAT CTTCTGGTTG
CTGCAACATA TCCACAGCCT GCTGGGTAAC TGGGGCTGGT CGATCATTGT CCTGACCATG
CTCATCAAGG GCCTGTTCTT CCCGCTGTCG GCCGCCAGCT ACCGCTCGAT GGCGCGCATG
CGTGCCGTGG CGCCGAAGCT CGCCGCACTG AAGGAACGCT TCGGTGACGA TCGCCAGAAG
ATGTCCCAGG CGATGATGGA GCTGTACAAG AAAGAGAAGA TCAACCCACT GGGTGGATGC
TTGCCGATCC TGGTACAGAT GCCGGTGTTC CTGGCCCTGT ACTGGGTGCT GCTTGAAAGC
GTCGAGATGC GCCAGGCCCC ATGGATGCTG TGGATCACCG ACCTGTCGAT CAAGGATCCG
TTCTTCATCC TGCCGATCAT CATGGGCGCT ACCATGTTCA TCCAGCAGCG CCTGAACCCG
ACGCCGCCGG ATCCGATGCA GGCCAAGGTG ATGAAAATGA TGCCGATCAT CTTCACCTTC
TTCTTCCTGT GGTTCCCGGC TGGCCTGGTG CTGTACTGGG TTGTGAACAA CTGCCTGTCG
ATTTCGCAGC AGTGGTACAT CACCCGCCGT ATCGAAGCAG CGACCAAAAA AGCTGCTGCT
TGA
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| Protein sequence | MDIKRTILIA ALAIVSYVMV LKWNDDYGQA ALPTQNTAAS TVAPGLPDGV PAANNGASAD
VPSANAESSP AELAPVALSK DLIRVKTDVL ELAIDPVGGD IVQLNLPKYP RRQDHPDIPF
QLFDNGGERV YLAQSGLTGA NGPDARSTGR PLYAAEQKSF QLADGQEQLV VDLKFSDNGV
NYIKRFSFKR GEYDLSVSYL IDNQSGQAWS GNMFAQLKRD ASGDPSSSTA TGTATYLGAA
LWTAGEPYKK VSMKDIDKGS LKENVSGGWV AWLQHYFVTA WIPAKSDNNV VQTRKDSQGN
YIIGYTGPAI SVPAGGKAET SAMLYAGPKI QSKLKELSPG LELTVDYGFL WFIAQPIFWL
LQHIHSLLGN WGWSIIVLTM LIKGLFFPLS AASYRSMARM RAVAPKLAAL KERFGDDRQK
MSQAMMELYK KEKINPLGGC LPILVQMPVF LALYWVLLES VEMRQAPWML WITDLSIKDP
FFILPIIMGA TMFIQQRLNP TPPDPMQAKV MKMMPIIFTF FFLWFPAGLV LYWVVNNCLS
ISQQWYITRR IEAATKKAAA
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