| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_5203 |
|---|
| Symbol | |
|---|
| ID | 6114205 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 5762534 |
|---|
| End bp | 5763070 |
|---|
| Gene Length | 537 bp |
|---|
| Protein Length | 178 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641625026 |
|---|
| Product | F0F1 ATP synthase subunit delta |
|---|
| Protein accession | YP_001752047 |
|---|
| Protein GI | 170724359 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0712] F0F1-type ATP synthase, delta subunit (mitochondrial oligomycin sensitivity protein) |
|---|
| TIGRFAM ID | [TIGR01145] ATP synthase, F1 delta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.021535 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGAAC TGACCACGTT GGCCCGACCT TACGCTAAGG CTGCCTTCGA GCATGCCCAG
GCCCATCAGC AACTGGCCAA TTGGTCAGCC ATGCTCGGCC TGGCTGCTGC GGTGTCGCAA
GACGACACCA TGCAGCGCCT GCTCAAGGCC CCGCGACTGA CGAGCGCAGA AAAGGCCGCC
ACGTTCATTG ACGTGTGCGG TGACAAGTTC AATGCACAGG CACAGAATTT CATTCGTGTT
GCCGCGGAAA ACGACCGTCT CCTGCTTCTG CCGGAGATTG CCGCTCTGTT CGACCTGTAC
AAGGCCGAGC AAGAGAAATC CGTGGACGTG GAAGTCACCA GTGCTTTTGC GTTGAACCAA
GAACAGCAAG ACAAACTCGC CAAGGTTCTC AGTGCACGGT TAGGCCAGGA AGTGCGCCTG
CACGCGTCGG AGGATGCCAA CCTGATTGGT GGCGTCGTCA TCCGCGCTGG TGACCTGGTA
ATCGATGGCT CTGTTCGCGG CAAAATCGCG AAACTGGCCG AAGCCTTGAA ATCTTGA
|
|---|
| Protein sequence | MAELTTLARP YAKAAFEHAQ AHQQLANWSA MLGLAAAVSQ DDTMQRLLKA PRLTSAEKAA
TFIDVCGDKF NAQAQNFIRV AAENDRLLLL PEIAALFDLY KAEQEKSVDV EVTSAFALNQ
EQQDKLAKVL SARLGQEVRL HASEDANLIG GVVIRAGDLV IDGSVRGKIA KLAEALKS
|
|---|
| |