| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_5180 |
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| Symbol | |
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| ID | 6114182 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 5738293 |
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| End bp | 5740110 |
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| Gene Length | 1818 bp |
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| Protein Length | 605 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641625004 |
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| Product | CopA family copper resistance protein |
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| Protein accession | YP_001752025 |
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| Protein GI | 170724337 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2132] Putative multicopper oxidases |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01480] copper-resistance protein, CopA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.116065 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAAGCA AAACCACGAG ACGATCATTC GTCAAAGGCC TGGCCGCTAC CGGACTTCTG
GGTGGGCTCG GCATGTGGCG CGCGCCGGTC TGGGCTGTGA CCAGCCCTGG CCAACCGAAC
GTGCTCAGCG GCAATGAATT CGACCTGTAT ATCGGTGAAC TGCCCGTCAA CATTACGGGG
GCAGCTCGTA CGGCCATGGC CATCAACGGC TCCGTGCCTG GGCCGATCCT GCGATGGCGC
GAAGGCGACA CCGTGACGCT GCGTGTACGC AACCGGTTGA AACAGGACAC CTCCATTCAC
TGGCACGGCA TAATCCTGCC CGCCAATATG GACGGTGTGC CGGGCTTGAG CTTTCACGGC
ATCGCTCCCG ATGGCATGTA CGAATACAAG TTCAAGGTCC ACCAGAACGG CACTTACTGG
TATCACAGCC ACTCAGGCCT CCAAGAGCAG TCTGGGGTCT ATGGCGCACT GGTGATCGAT
GCTAAGGATC CCGAGCCGTT TGTATATGAC CGCGATTACG TCGTCATGCT CAGCGATTGG
ACGGATGAGG ACCCGGCGCG GGTGCTCTCC AAACTCAAGA AGCAGTCCGA CTATTACAAC
TTCCACAAGC GCACGGTCAG CGACTTCGTT GACGACGTGA GCGAGAAAGG CTGGTCGGCC
GCTGTAGCGG ATCGGAAGAT GTGGGCTGAA ATGAAGATGA GCCCCACCGA CCTCGCAGAT
GTGAGCGGGT ATACCTACAC CTACCTCATG AACGGCCAAG CTCCGAACGG CAACTGGACG
GGTATCTTCA AGCCCGGCGA GAAGATCCGC CTGCGATTCA TCAACGGCTC GGCCATGACC
TATTTCGATG TCCGGATTCC TGGGCTCAAG ATGACGGTTG TGGCTGCCGA CGGCCAGTAC
GTCAAACCCG TATCGGTCGA TGAGTTCCGG ATCGCCGTTG CTGAAACCTA CGATGTCATC
GTCGAGCCTG AAAACGAACA GGCCTATACG ATTTTCGCGC AATCCATGGA CCGTACCGGG
TATTCCCGAG GCACCCTGGC AGTTCGCGAA GGCTTGCAAG CGCCCGTACC GGCGGTAGAT
CCACGCCCGA TCATCGCCAT GAGCGATATG GGCATGGACC ACGGCAGCAT GGGCGGAATG
GATCATGGCA GCATGGCTGG CATGGACCAG GGCAGCATGG CCGGCATGGA TCACAGCAAG
ATGGCTGGAA TGGACCACGG CAGCATGGCC GGTATGGACC ACAGCAAGAT GACTGGGATG
GGCAATGAAG GCATGGCCGG CATGAGCGGC GCAATGCAAA GCCATCCGGC TTCCGAGACC
AACAACCCAC TGGTCGATAT GCAGACTATG TCGCCAACGC CAAAGCTGAA CGATCCGGGA
ATTGGCCTAC GCAACAACGG GCGTCGAGTG CTGACGTACG CCGATCTGCG GAGCACCTTC
ATCGATCCCG ATGGTCGAGA GCCTGGACGG ACAATCGAAC TGCACCTTAC CGGCCACATG
GAGAAGTTCG CGTGGTCGTT CGACGGTATC AAATTCTCCG ACGCTGAACC GCTGCGGTTG
AAATATGGCG AGCGTCTTCG CATCACCTTG GTCAACGACA CCATGATGAC TCACCCCATC
CACCTCCACG GTATGTGGAG TGATCTGGAG GACGAGAACG GCAACTTCAT GGTTCGCAAG
CACACCATCG ACATGCCACC TGGCTCAAAA CGAAGCTATC GCGTCACCGC AGATGCCTTG
GGACGTTGGG CCTATCACTG TCACCTACTG TTCCACATGG AAATGGGCAT GTTCCGAGAA
GTACGTGTGG ACGAATGA
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| Protein sequence | MQSKTTRRSF VKGLAATGLL GGLGMWRAPV WAVTSPGQPN VLSGNEFDLY IGELPVNITG
AARTAMAING SVPGPILRWR EGDTVTLRVR NRLKQDTSIH WHGIILPANM DGVPGLSFHG
IAPDGMYEYK FKVHQNGTYW YHSHSGLQEQ SGVYGALVID AKDPEPFVYD RDYVVMLSDW
TDEDPARVLS KLKKQSDYYN FHKRTVSDFV DDVSEKGWSA AVADRKMWAE MKMSPTDLAD
VSGYTYTYLM NGQAPNGNWT GIFKPGEKIR LRFINGSAMT YFDVRIPGLK MTVVAADGQY
VKPVSVDEFR IAVAETYDVI VEPENEQAYT IFAQSMDRTG YSRGTLAVRE GLQAPVPAVD
PRPIIAMSDM GMDHGSMGGM DHGSMAGMDQ GSMAGMDHSK MAGMDHGSMA GMDHSKMTGM
GNEGMAGMSG AMQSHPASET NNPLVDMQTM SPTPKLNDPG IGLRNNGRRV LTYADLRSTF
IDPDGREPGR TIELHLTGHM EKFAWSFDGI KFSDAEPLRL KYGERLRITL VNDTMMTHPI
HLHGMWSDLE DENGNFMVRK HTIDMPPGSK RSYRVTADAL GRWAYHCHLL FHMEMGMFRE
VRVDE
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