| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_5177 |
|---|
| Symbol | |
|---|
| ID | 6114179 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 5735656 |
|---|
| End bp | 5737062 |
|---|
| Gene Length | 1407 bp |
|---|
| Protein Length | 468 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 641625001 |
|---|
| Product | heavy metal sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001752022 |
|---|
| Protein GI | 170724334 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR01386] heavy metal sensor kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.477019 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCCGC AATCATCGCT CGTCAAGCGA CTGACCCTGA TGTTCATGTT CGCGGTGACT
GCTGTCTTGG TCGTTGCCGG CGTGGCTTTC TACGGGCTCA GCCAGCACCA TTTCCGGATG
CTGGATGAGC AGGCGCTCTC CGAAAAGCTG GAGTCAACGC GTCATATTCT GTCCATTTCA
GCAGCGCGAG GCGAGCTCGG CGATCAGGAG CAGCAGCTGC GGGCATTGCT CGGCGCACAT
CAGGATCTTT CGGCGAAAAT CACCAAGGCT GACGGAACGA CCCTTTTTTC AGACTCCAAA
GCCTCCCAAA TTCCTCAGCG GTTCGAGCAG GCGCGCCAGG GTGCGGTCTG GGAGTGGCAG
GATGAATCGC AGAACTTCCG CGGTATCACC GCCCAGTTGG CCATCGCGGG CGAGCCGGAA
CCTGTGACGG CGGTGCTGAT GCTCGATGTC ACCACTCATG CCCATTTCTT CCACACCTTG
CAGTGGTGGT TCGGGATCGG CTTGGTGATC AGTGCAGTGG TGAGTGCAGG CTTGGGCTGG
GTCGTGGCCA AAAGCGGGCT TCGGCCTGTC GGGCAAATCA CCAAAGTGGC GACCGCGATG
TCAGCAAGAT CGCTCCGCGA GCGCATTCCC CTGAAGCCCG TACCGATTGA GCTTCAGGAG
CTCATCCTGT CTTTCAACGG GATGCTGGGA CGATTGGAGG ATGCATTCGT TCGGTTGTCC
AACTTTTCTG CCGATATCGC TCACGAGTTG AGAACGCCGG TCAGCAACCT ACTGACCCAT
ACTGAAGTGG TGCTCACCAA GAAGCGTGAC CTGGATGCAT ATGAGGAAAA CCTCTATTCG
AACCTGGAAG ACCTCAAGCG CATGTCGCGC ATGATTGACG ACATGCTTTT CCTCGCCAAG
GCGGACAACG GTCTGATCGT GCCCGAGCAG ATCGATGTGG ACCTCTCCGA ACTCGTATAC
AAGCTGTTCG AGTACTACCA GTTCCTGGCT GAGGACCGGG GCATTCAGCT GACCCTCCAA
GGTCGTGGCA AGGTTCGTGG CGATCGCCTG ATGATTGACC GAGCGCTTTC CAACATTTTA
TCGAACGCGT TGCGCTACAC CCCGGAAGGC AACGAGATAT CAGTGCAGAT CGAGCAAACA
CGTGAAACCG TGACGCTATC CGTACGTAAC AGCGGAGTAA CCATCGATCC TCAGCACATT
GGCAAGATCT TCCACCGGTT CTATCGGGCC GATCCAGCCA GACGCGAAGG CGGGCCAAGC
AATGCAGGCC TAGGCCTGTC GATAACACGC TCCATCATCG AGGCTCACAG CGGACGAATT
TGGTGTACTT CAGCGGAGGG TGTCACAACC TTCTTCATCA GTCTCCCAGC CTCCATGCGG
TTGGTTGGTG CAGCCCCAAC CCCTTAA
|
|---|
| Protein sequence | MRPQSSLVKR LTLMFMFAVT AVLVVAGVAF YGLSQHHFRM LDEQALSEKL ESTRHILSIS
AARGELGDQE QQLRALLGAH QDLSAKITKA DGTTLFSDSK ASQIPQRFEQ ARQGAVWEWQ
DESQNFRGIT AQLAIAGEPE PVTAVLMLDV TTHAHFFHTL QWWFGIGLVI SAVVSAGLGW
VVAKSGLRPV GQITKVATAM SARSLRERIP LKPVPIELQE LILSFNGMLG RLEDAFVRLS
NFSADIAHEL RTPVSNLLTH TEVVLTKKRD LDAYEENLYS NLEDLKRMSR MIDDMLFLAK
ADNGLIVPEQ IDVDLSELVY KLFEYYQFLA EDRGIQLTLQ GRGKVRGDRL MIDRALSNIL
SNALRYTPEG NEISVQIEQT RETVTLSVRN SGVTIDPQHI GKIFHRFYRA DPARREGGPS
NAGLGLSITR SIIEAHSGRI WCTSAEGVTT FFISLPASMR LVGAAPTP
|
|---|
| |