Gene PputW619_5161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_5161 
Symbol 
ID6114163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp5722352 
End bp5723293 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content58% 
IMG OID641624985 
Productcation diffusion facilitator family transporter 
Protein accessionYP_001752006 
Protein GI170724318 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1230] Co/Zn/Cd efflux system component 
TIGRFAM ID[TIGR01297] cation diffusion facilitator family transporter 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCGG ACATCCAAGC TATGAGCACG ACGGCAACCA CCCATGACCA TGTTTTTCTC 
GGTGCCTCCC ATGAAGAGAA TGCGAAGCGC ACGCTCTGGG TCGTGTTGCT GACCGTTGTA
ATGATGGTGG GTGAGATTGC CGCAGGCTAC ATCACCGGAT CGATGGCCCT ACTCGCCGAC
GGCTTCCACA TGGCCACACA CGCTGGTGCG CTCGGCATCG CGGCCGCTGC ATACGCGTAT
GCCAAGCGAC ACGCCACCAA CTCTGGGTTC AGTTTTGGTA CGGGCAAGGT CGGCGATCTG
GGTGGGTTTG CTTCGGCGCT GATCCTGGGA CTCGTTGCCC TGGCAGTGGG TGCTGAGTCG
ATCGTCCGTT TGTTCCAACC GAATGAAGTG CAATTCAGCA TCGCGATTGG TATCGCGATA
GTTGGCTTGC TGGTGAACAT CGTGAGTGCG TTGCTGCTGG GCCACGGGCA CAACCATGAT
CACGGGCATG ACCACCACCA TCACCACGAT CATGGCCACG GGCACGGCGA CAACAATCTG
CAATCGGCCT ATGTGCATGT CCTGGCCGAT GCACTGACCT CGGTCCTTGC GATCGTCGCA
CTGCTGGCGG GCAAATACCT TGGATGGGTC TGGCTCGACC CTGTGATGGG CATCGTCGGC
GCCGTTGTTA TCGGGCGCTG GTCCTGGAAC CTGATGAAAG TGACTGCCGG CGTCCTTCTG
GACAAAACTG ATGATCACGT AGCGCAGGAA ATCCGCGAGT TCATTGAGCA ACCGGGTGAC
GTCCGCATCT GCGATCTTCA CGTTTGGCGC GTAGGCCCCG ACGCCCACGC CGCTATCGTC
AGCGTTGTTG GCAAAGCCGC AACCAGTGTT GAAAGTATTC GTGAGCGGCT GTTGCCGGTT
CATGAAATTC GGCACCTGAC CGTCGAAATT CACCAAGCCT AA
 
Protein sequence
MTSDIQAMST TATTHDHVFL GASHEENAKR TLWVVLLTVV MMVGEIAAGY ITGSMALLAD 
GFHMATHAGA LGIAAAAYAY AKRHATNSGF SFGTGKVGDL GGFASALILG LVALAVGAES
IVRLFQPNEV QFSIAIGIAI VGLLVNIVSA LLLGHGHNHD HGHDHHHHHD HGHGHGDNNL
QSAYVHVLAD ALTSVLAIVA LLAGKYLGWV WLDPVMGIVG AVVIGRWSWN LMKVTAGVLL
DKTDDHVAQE IREFIEQPGD VRICDLHVWR VGPDAHAAIV SVVGKAATSV ESIRERLLPV
HEIRHLTVEI HQA