| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_5153 |
|---|
| Symbol | |
|---|
| ID | 6114155 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | - |
|---|
| Start bp | 5713505 |
|---|
| End bp | 5714812 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 641624977 |
|---|
| Product | sodium:dicarboxylate symporter |
|---|
| Protein accession | YP_001751998 |
|---|
| Protein GI | 170724310 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 45 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAAATTT CCAAATCCCG CTGGTACGGC CAGCTGTATG TGCAAGTGCT GATCGGCATC
GTGATCGGCG CGGCAATCGG TTACTTCTTA CCCGATATCG GTGCCAAGCT CCAACCCTTC
GCCGATGGCT TCATCAAACT GATCAAGATG CTCTTGGCAC CGATCATCTT CGGTACGGTT
GTTGTTGGTA TCGCCAAGAT GGGCAGTATC AAAGAGGTTG GTCGAATTGG CGTTAAGGCG
CTTATCTACT TCGAGATACT GTCGACCATT GCCTTGGTCG TCGGCCTCAT TGTGGTCAAC
ATCGTTAAAC CCGGCGAAGG CATGAACATC AATGCCAACG CCCTCGATGG CAGTGCCATC
AGCAAATACA GCCAAGCCGC GAGTGAACAA GGCGGCACGA TCGAATTCTT CCTCAATATC
ATCCCACATA CCTTCGTCGG CGCTTTCTCC AACGGCGTAA TGCTGCAGGT GATCCTGCTT
TCTGTCTTGA TGGGCGTCGC TCTGGTGCAG ATGGGTGAAA CCAGCAAGCC GCTGATCAAT
ACCATCGACT TGTTCCTTCA AGGCCTGTTC AAAATCGTCG CAATGGTCAT GCGCCTCGCT
CCGATCGGCG CGGGTGCCGG CATGGCATTC ACCATTGGCA AATACGGTAT CGGCACGTTG
CTGTCACTCG GCCAATTGCT GGTCGCACTG TATATCACCA CTCTGATATT CATTGTGGTC
GTGCTCGGTG CCGTCGCCAG ATGGTCCGGA ATGCCGCTGA TGCAGTTCCT TCGTTACTTC
AAAGATGAAA TTCTCATCAC CCTCGGCACG TGTTCAACCG AAGCCGTGCT ACCGAGAATG
ATGGTGAAAC TAGAGAAGCT CGGCTGCAAG AAATCGGTGG TCGGCATGGT GCTGCCTACG
GGCTACACCT TTAACGCGGA CGGCACCTGC ATCTACCTCA CAATGGCTGC CATCTTCATC
GCTCAAGCGA CCAATACGCC GCTGACATTC ATGGATCAAA TGATTCTGCT GGCCGTATTC
CTGCTGACCT CCAAAGGCTC GGCTGGCGTT GCGGGTGCGG GGTTTGTAAC GCTGGCTGCA
ACGCTCACAA CTATCCATTC CATTCCGCTG GTTGGCCTTG TGCTGCTGCT GGGCATCGAT
CGGTTCCTCA ATGAAGCGCG GGCGGTGACC AACCTGATCG GTAATGGCAT CGGCACTATC
GCGATCGCCA AGTGGGACAA CTCGTTTGAT GTCGAAGCTT GTGAACGAGA AATCGCAGCC
ATGAAACAGG AAAAGGCGGC AAGGAAGGCC TTGCTGGCGC ATAAGTGA
|
|---|
| Protein sequence | MEISKSRWYG QLYVQVLIGI VIGAAIGYFL PDIGAKLQPF ADGFIKLIKM LLAPIIFGTV
VVGIAKMGSI KEVGRIGVKA LIYFEILSTI ALVVGLIVVN IVKPGEGMNI NANALDGSAI
SKYSQAASEQ GGTIEFFLNI IPHTFVGAFS NGVMLQVILL SVLMGVALVQ MGETSKPLIN
TIDLFLQGLF KIVAMVMRLA PIGAGAGMAF TIGKYGIGTL LSLGQLLVAL YITTLIFIVV
VLGAVARWSG MPLMQFLRYF KDEILITLGT CSTEAVLPRM MVKLEKLGCK KSVVGMVLPT
GYTFNADGTC IYLTMAAIFI AQATNTPLTF MDQMILLAVF LLTSKGSAGV AGAGFVTLAA
TLTTIHSIPL VGLVLLLGID RFLNEARAVT NLIGNGIGTI AIAKWDNSFD VEACEREIAA
MKQEKAARKA LLAHK
|
|---|
| |