| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_5127 |
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| Symbol | |
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| ID | 6114129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 5686983 |
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| End bp | 5687849 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641624951 |
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| Product | RpiR family transcriptional regulator |
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| Protein accession | YP_001751972 |
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| Protein GI | 170724284 |
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| COG category | [K] Transcription |
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| COG ID | [COG1737] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.334763 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATCTGT TGCAACATAT CGCCCAATCG CGCCACCTGC TGCGCAAATC GGAACTCAAA
GTGGCCGACC ACGTGCTGCT GGACCCGGCT GCCGTCATGC ACAGCTCGAT GGCGGACCTT
GCACACAGCG TGGGTATCAG CGAGCCGACC ATCGTGCGGT TCTGCCGGGC GATCGGCTGT
TCAGGTTTTC AGGACCTCAA GCTCAAGCTG GCGCAGAGCC TGGCTGCAGG CGCCAGCTTC
GGGCAGTTCG CCATCCATGA GGATGACTCG GTTGCCGATT ACAGCCTGAA GATTTTCGAC
ACGACCTTGC ACACCCTGAT GGAAGTGCGT GAGCACCTCG ACCCGCACGC ATTGCAGCAG
GCGGTGAGTG CAATGGCGCA GGCGCAACGT GTGGAGTTTT ATGGCTTTGG TGCATCCGGC
GCGGTTGCTG CAGACGCGCA GCACAAGTTT TTCCGCCTGT TGCTCAGTGC CGCCGCTTAC
TCCGACCCGC ATATGCAGGC CATGTCGGCT GTAACCCTCA AGCCGGGTGA CGTGGCTGTG
TGCATTTCCC AGTCCGGGCG TTCCAAGGAC CTTTTGATCA CCGCTAACCT GGTGCGTGAG
AGCGGCGCCA ACCTGATCAC CCTGTGCCCC AGCCAGACCC CACTGGCCGA GCTTTCGACC
GTCAACCTGG CGATCGATGT GCACGAAGAC ACTGAAATCT ACACCCCGCT GACCTCGCGT
ATCGCCCACC TGGTAGTGAT CGATGTGCTG GCCATGGGCG TGGCCATGGC CCGTGGGCCG
AGCCTGGTCA ATCACCTCAA GAGTGTGAAG CGCAGCTTGC GCAGCCTGCG GTTGTCGCCC
AAGTCGATCA AGGCGATGGA TGACTGA
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| Protein sequence | MNLLQHIAQS RHLLRKSELK VADHVLLDPA AVMHSSMADL AHSVGISEPT IVRFCRAIGC
SGFQDLKLKL AQSLAAGASF GQFAIHEDDS VADYSLKIFD TTLHTLMEVR EHLDPHALQQ
AVSAMAQAQR VEFYGFGASG AVAADAQHKF FRLLLSAAAY SDPHMQAMSA VTLKPGDVAV
CISQSGRSKD LLITANLVRE SGANLITLCP SQTPLAELST VNLAIDVHED TEIYTPLTSR
IAHLVVIDVL AMGVAMARGP SLVNHLKSVK RSLRSLRLSP KSIKAMDD
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