| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_5124 |
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| Symbol | |
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| ID | 6114126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | - |
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| Start bp | 5682234 |
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| End bp | 5684042 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641624948 |
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| Product | pyruvate carboxylase subunit B |
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| Protein accession | YP_001751969 |
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| Protein GI | 170724281 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG5016] Pyruvate/oxaloacetate carboxyltransferase |
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| TIGRFAM ID | [TIGR01108] oxaloacetate decarboxylase alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.588617 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAGA AGATCTTTGT TACCGACACA ATCCTGCGTG ACGCCCACCA GTCCCTGCTG
GCTACCCGCA TGCGTACCGA AGACATGCTG CCGATCTGCG ACAAGCTCGA CAAGGTCGGC
TACTGGTCGC TGGAAGTCTG GGGCGGCGCC ACTTTCGATG CCTGCGTGCG CTTCCTCAAG
GAAGACCCGT GGGAGCGCCT GCGTAAACTG CGCAATGCGC TGCCCAACAC CCGCCTGCAG
ATGCTTCTGC GCGGGCAGAA CCTGCTGGGC TACCGCCACT ACAGCGATGA CGTGGTCAAG
GCGTTCGTGG CCAAGGCGGC GGTCAATGGC ATCGACGTGT TCCGTATCTT CGACGCAATG
AACGATGTGC GTAACCTGCG CGTGGCCATC GAGGCGGTGA AGGCTGCCGG TAAGCACGCC
CAAGGTACCA TCGCTTACAC CACCAGCCCG GTGCACACCA TCGAAGCCTT CGTGAACCAG
GCTAAGCAGA TGGAAGCCAT GGGTTGCGAC TCGGTGGCGA TCAAGGACAT GGCTGGCCTT
TTGACCCCGT ATGCCACCGG CGAGTTGGTC AAGGCGCTGA AGGCCGAGCA GTCGCTGCCT
GTGTTCATCC ATTCCCACGA TACTGCCGGC CTGGCCGCCA TGTGCCAGCT CAAGGCTGTG
GAAAACGGTG CTGACCATAT CGACACCGCC ATCTCCAGCT TTGCCTGGGG GACCAGCCAC
CCGGGTACCG AGTCGATGGT AGCCGCGCTC AAGGGCAGCG AGTTCGACAC CGGTCTGGAC
CTGGAACTGC TGCAGGAAAT CGGCCTGTAC TTCTATGCCG TGCGCAAAAA GTACCACCAG
TTCGAAAGCG AGTTCACTGC GGTGGACACC CGCGTACAGG TCAACCAGGT GCCAGGCGGG
ATGATTTCCA ACCTTGCCAA CCAGCTCAAG GAACAGGGCG CGCTCAACCG CATGAACGAG
GTGCTGGCCG AGATCCCGCG GGTGCGAGAA GACCTTGGCT TCCCACCTCT GGTGACCCCG
ACCTCGCAGA TCGTCGGTAC CCAGGCGTTC TTCAACGTAC TGGCCGGCGA ACGCTACAAG
ACCATCACCA ACGAAGTGAA GCTGTACCTG CAAGGCGGTT ACGGCAAGGC GCCGGGCGTG
GTCAATGAGC AACTGCGCCG CCAGGCGATC GGCAGCGAAG ACGTGATCGA TGTGCGCCCG
GCCGATCTTC TCAAGCCGGA AATGACCAAA CTGCGTGCCG ACATCGGCGC CTTGGCGCAC
AGCGAGGAAG ATGTGCTCAC CTTCGCCATG TTCCCGGACA TTGGCCGTAA GTTCCTCGAA
GAGCGTGAAG CCGGCACCCT GACCCCCGAA GCGCTGCTGC CGATCCCGGA AGCCGGTGCA
GTCGCCGCCC CGGGTGGTGA AGGTGTGCCA ACCGAGTTCG TAATCGACGT GCACGGTGAA
ACCTACCGCG TCGACATCAC CGGTGTGGGC GTCAAGGCCG AAGGCAAGCG CCACTTCTAC
CTGTCGATCG ACGGCATGCC AGAAGAAGTG GTGTTCGAGC CCCTCAACGA GTTTGTTGGC
GGCGGCAGCA GCAAGCGCAA GCAGGCCAGT GCGCCAGGCC ACGTCAGCAC CACCATGCCG
GGCAACATCG TCGATGTACT GGTCAAGGAA GGCGACACAG TCAAGGCTGG CCAGGCAGTG
CTGATCACCG AAGCAATGAA GATGGAAACC GAAGTGCAGG CGGCCATCGC CGGCAAGGTC
GTGGCCATCC ACGTGGCCAA GGGCGATCGC GTGACTCCGG GTGAGATCCT TATCGAGATC
GAGGGCTGA
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| Protein sequence | MSKKIFVTDT ILRDAHQSLL ATRMRTEDML PICDKLDKVG YWSLEVWGGA TFDACVRFLK
EDPWERLRKL RNALPNTRLQ MLLRGQNLLG YRHYSDDVVK AFVAKAAVNG IDVFRIFDAM
NDVRNLRVAI EAVKAAGKHA QGTIAYTTSP VHTIEAFVNQ AKQMEAMGCD SVAIKDMAGL
LTPYATGELV KALKAEQSLP VFIHSHDTAG LAAMCQLKAV ENGADHIDTA ISSFAWGTSH
PGTESMVAAL KGSEFDTGLD LELLQEIGLY FYAVRKKYHQ FESEFTAVDT RVQVNQVPGG
MISNLANQLK EQGALNRMNE VLAEIPRVRE DLGFPPLVTP TSQIVGTQAF FNVLAGERYK
TITNEVKLYL QGGYGKAPGV VNEQLRRQAI GSEDVIDVRP ADLLKPEMTK LRADIGALAH
SEEDVLTFAM FPDIGRKFLE EREAGTLTPE ALLPIPEAGA VAAPGGEGVP TEFVIDVHGE
TYRVDITGVG VKAEGKRHFY LSIDGMPEEV VFEPLNEFVG GGSSKRKQAS APGHVSTTMP
GNIVDVLVKE GDTVKAGQAV LITEAMKMET EVQAAIAGKV VAIHVAKGDR VTPGEILIEI
EG
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