| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_5123 |
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| Symbol | |
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| ID | 6114125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 5681269 |
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| End bp | 5682090 |
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| Gene Length | 822 bp |
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| Protein Length | 273 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641624947 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_001751968 |
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| Protein GI | 170724280 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.571072 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.507902 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGCCC ATCAACCTGC ACCCAAGCCC GTCGTCGCCG CGACGGGTTC ACGCCTGTTC
GGCTTTCGCA CCCGCCTGTA CCTGACGTGG CTAGTGTTGC TGTTGCTGTT CGTGGGCTTC
TTTCTCAGCT TTGATCTGAA ATTCTCGATC ATCGTCGAGA AGTTCCCCAA CCTGGCAGGC
TTCAAGCTCG GCCCCAATGG CTTCCTGCAG GGCGCTGCGC TGACCCTGTT CCTGTGCTTG
TGCTCTATGG TGGTGTCGGT GCTGTTGGGC TTTGCCGCCG CCCTGGCACG GTTGTCGAAG
AGTGCGCTGC TGTTCGGCGT GGCCAGCTTC TACACCTCGT TTTTCCGCGG CACGCCGCTG
CTGATCCAGA TCCTGTTGAT CTACCTCGGC TTGCCCCAAG TGGGCCTGGT GCCAGGTGCA
ATCGCAGCGG GCATCATCGC CCTGTCGCTC AATTATGGCG CTTACCTGAG CGAAATCTTC
CGAGCCGGCA TCATTGGCGT TGCCGTGGGC CAGCGCCATG CAGCGCTCGC CCTGGGCATG
CGCCCGGTGG CGATCTTCTG GCACATCACC CTGCCCCAGG CCATGCGCAC CATCATCCCG
CCAAGCGCCA ACCAGTTCAT CTCGATGCTC AAGGACTCGT CGCTGATTTC GGTGATGGGT
GTCTGGGAAG TCATGTTCCT GGCCCAGTCG TATGGGCGCT CAAGCTATCG CTACCTAGAG
ATGCTGACGA CAGCTGCGGT GATCTACTGG GTGCTCTCGA TCCTGCTCGA ACTGGCCCAG
GCCAGGCTGG AGCGGCATTT TGGCAAGGGC TATCAGCGCT AG
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| Protein sequence | MSAHQPAPKP VVAATGSRLF GFRTRLYLTW LVLLLLFVGF FLSFDLKFSI IVEKFPNLAG
FKLGPNGFLQ GAALTLFLCL CSMVVSVLLG FAAALARLSK SALLFGVASF YTSFFRGTPL
LIQILLIYLG LPQVGLVPGA IAAGIIALSL NYGAYLSEIF RAGIIGVAVG QRHAALALGM
RPVAIFWHIT LPQAMRTIIP PSANQFISML KDSSLISVMG VWEVMFLAQS YGRSSYRYLE
MLTTAAVIYW VLSILLELAQ ARLERHFGKG YQR
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