| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_5112 |
|---|
| Symbol | |
|---|
| ID | 6114114 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas putida W619 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010501 |
|---|
| Strand | + |
|---|
| Start bp | 5670307 |
|---|
| End bp | 5671014 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 641624936 |
|---|
| Product | lipoprotein |
|---|
| Protein accession | YP_001751957 |
|---|
| Protein GI | 170724269 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.217331 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCGT TCGCATCCCG TTATCTGCTT GTTGCCGTGT TTTCCCTGTT CCTGGCCGCT
TGTTCAAGCG CGCCGGTCGA GCAGACCGGT GCACCTGCCC AAGCCGATGC CTGGCAGCAG
CTGCAGCAAA GTATCAACAG CAATGAGTTG GCCACGGCCG AAGATCAGCT TGCCTTGTTG
CAGGCTCAAT CGCCCGACGA TGGCCGCCTG GAACAGTACC AGCGGCAGCT GGCTGAGGCT
TACCTCAAAC GCAGCCAGAT CGTCCTTCAG AAGGGTGACG TCAACGCTGC CGCCACAGCG
CTGGCACGTG CCCGCGCACT GATGCCGCAG GCACCTGCCG TGACTGGCGG TGACGCAGTC
TCGCAGGCAC GCAAGGCTGA GCTGGAAAAA GCCGAAGCTG CCTTGAAGGC TGCCGAGGCC
AAGCCCAAGG CGCGTGTGAT TGACCCAACC GCGCCTAGCA CGGTCATTGC ACTGAAGACC
ACGGACATCA GTGCCATGCG CCGGCAGCTC GATGAAATTG CCACTGATGT GGTGAATTAT
CAGTGCGAAG TGGTGTTTCA GGTACCTCGC ACCGAAGATG CGCCTTGGTT GAAGACCTTG
CTGGAAAAGC GGGTTCTGAA GATCGACAGC AGCTTTGAAC TTGAGCAAAA ACACGAGATT
CAGCGTAAGT TGCCCGCTCA GGTGGTATTG GTACCGCATC AGCGTTGA
|
|---|
| Protein sequence | MKPFASRYLL VAVFSLFLAA CSSAPVEQTG APAQADAWQQ LQQSINSNEL ATAEDQLALL
QAQSPDDGRL EQYQRQLAEA YLKRSQIVLQ KGDVNAAATA LARARALMPQ APAVTGGDAV
SQARKAELEK AEAALKAAEA KPKARVIDPT APSTVIALKT TDISAMRRQL DEIATDVVNY
QCEVVFQVPR TEDAPWLKTL LEKRVLKIDS SFELEQKHEI QRKLPAQVVL VPHQR
|
|---|
| |