Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_5097 |
Symbol | |
ID | 6114099 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | - |
Start bp | 5654468 |
End bp | 5656096 |
Gene Length | 1629 bp |
Protein Length | 542 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641624921 |
Product | EAL domain-containing protein |
Protein accession | YP_001751942 |
Protein GI | 170724254 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4943] Predicted signal transduction protein containing sensor and EAL domains |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.217688 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGCCCA TGTCGGCTCT GATAACTGCG TTGCGCCAAT TTTTTTACCG TCCCTGGATG CTGGCCTCCC TGGCAGCGTT GGCCAGCGCT GCGGTGTTGC TGACTGCTAG TATCGGTATT GCGCTGCAGC AGATGAAGCA GAGCGAGAGT GCGCAGATGA ATGCTCAGGG CGAGCGTTTT CTTGATCGCC TCGAGCAAGT TTTCGGTCAA CTGCGTGAAG GGGTCGATGA CCTGCAGGCG CAGCCTTTGC GCGGCTGCAA CCCGGCGATG CTGGCGTTGT TGCAGCAAGT TGGGCTGGGC TCGCGTTTCA TTTATGAGGC GGCATACGTA GACGTCAATG TCGCCTGCTC CAACCGCGGC GGGGCACGGG CTTTCGTGCC CACGCGGGCT CCGGACATCC AGGGCCCGAC CTACAGCTAT TGGCTCAATA CCACCACCGA ACCCAACGAA AACCTTGCGG CGTTGATGCT TGCACGGGGC AACTTCCTGG TCTCGACGTC GCGCGGGCAT TTGACCGACG TGGTTGACCT GCCGCCCGGA GGAAGCCTGT TGGTGGTGCT GGACAATGGC ACCAGAGCGA TACCAGTACT GGGGCCGCCA CAAGTCTGGC CGCCAGCTGA GCATTGGCCG CCACCCAGCG GCAATTCGTT GTTCGAGCTG CACGACCGCC TTGTCTATCG CATGCTGACC AAATCGCCCG ATTACCAGCT TGTGCTGATC GCACCGCGTG CCAGCCTGCC ATTGAGGATG AACGGCATGC TCTGGCTGCT GTTCCCCGGT AGTGTTCTGG CTGCCTGTTG TATCGGCTGG CTGGTACTGC AGCTGATCCT GCAAAGGCGT TCCATGAGCT CAGAGTTGCA GAACGCTTTA CGCCGCGGTG AACTGCAGGT GCTCTATCAG CCGATCATCG AGCTCGACAG CCGCCGCTGC GTGGGCGCTG AGGCGCTGGT ACGCTGGCGG CGCCCTGACG GGACCCTTAC CAGCCCGGAC CTGTTCATTC CGCTGGCCGA AAATACCGGG CAGATTCGCC AGATCACTGA TTTCGTGCTG CAACGGGTGC TTGAGCAACT TGGCCAGTTG CTGCGTTCGC ACCGCAACCT TTACATCTCG GTGAACCTGG CCGCCTGTGA TGTGATGGTC CCGCGCATTG GCCGGGTGGC GGCACGGTTG CTGGCACTGC ACAGGGTGGC TGCCAGCCAG ATTGCCTTCG AGGTTACCGA GCGGGGACTG ATCGATGTGG TGGTGGCCCG TGACAACCTG CAGGCGCTTC GTGCGGTGGG GCATCAGGTA TTGATCGATG ACTTCGGTAC TGGCTACTGC AGCCTGGCTT ATCTGCAGAC CTTGCCGGTG GACTGCCTGA AAATCGACAA GGCCTTCATC GACGCGCTCG GGCATGACGC CGCCAGCAGT GGGGTGGCGC CTCATATCAT TCGCATGGCC CATGACCTTC ATCTACGGGT GATAGCCGAA GGCATAGAGT GCGAGGCCCA GGCGGTGTTG CTCAACAGTG AGGGCGTCAA TTATGGCCAG GGCTGGCTGT TCGCCCATCC GCTTAATGCC CGGCAGTTCG TCGAGTTGGT GACGCGAGGG CGGCAGGTCC GGAGGCCGCG GATAGATGAT GAACCTTGA
|
Protein sequence | MLPMSALITA LRQFFYRPWM LASLAALASA AVLLTASIGI ALQQMKQSES AQMNAQGERF LDRLEQVFGQ LREGVDDLQA QPLRGCNPAM LALLQQVGLG SRFIYEAAYV DVNVACSNRG GARAFVPTRA PDIQGPTYSY WLNTTTEPNE NLAALMLARG NFLVSTSRGH LTDVVDLPPG GSLLVVLDNG TRAIPVLGPP QVWPPAEHWP PPSGNSLFEL HDRLVYRMLT KSPDYQLVLI APRASLPLRM NGMLWLLFPG SVLAACCIGW LVLQLILQRR SMSSELQNAL RRGELQVLYQ PIIELDSRRC VGAEALVRWR RPDGTLTSPD LFIPLAENTG QIRQITDFVL QRVLEQLGQL LRSHRNLYIS VNLAACDVMV PRIGRVAARL LALHRVAASQ IAFEVTERGL IDVVVARDNL QALRAVGHQV LIDDFGTGYC SLAYLQTLPV DCLKIDKAFI DALGHDAASS GVAPHIIRMA HDLHLRVIAE GIECEAQAVL LNSEGVNYGQ GWLFAHPLNA RQFVELVTRG RQVRRPRIDD EP
|
| |