Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_5088 |
Symbol | |
ID | 6114090 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 5645052 |
End bp | 5645675 |
Gene Length | 624 bp |
Protein Length | 207 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641624912 |
Product | hypothetical protein |
Protein accession | YP_001751933 |
Protein GI | 170724245 |
COG category | [R] General function prediction only |
COG ID | [COG3218] ABC-type uncharacterized transport system, auxiliary component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.33903 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.0631023 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCTGT CGCTGCGCCT GCTGGCCTTG ACGGCCGCGC TGAGCCTGTC TGCCGCCTGC TCGATCCTGC CCCAGAGCGA GCCTGTGGAT ATCTACCGGC TACCGGTCAA CCAAGCCAGC CACAGCGCGA CCCCGGTGCC ATGGTCGTTA CGCTTGAACA AGCCGCTGGC AAGCGAAGTG CTGGCCGGGC CACGCATCGC TGTGATCCCC AAGGGCGACG TGGTCAGCAG CTACAAAGGC GCCCGCTGGA GCGACCCGGT GCCGTTGCTG TTACGCAACC GCCTGCTCGA TGGCTTCCAG CGCGACGGGC GTGTACAGCG TCTGAGCGCC GACGACAGCA ACCTACAGGC CGACTATGAA CTGGCCGGTG AACTGCAGGC GTTTCAGAGC GAGTACCGGC CAACCGGTAC GGTGGAGGTA GTGATCCGCT ATGACGCGCG TCTGGTTCAG GGGCGCAGCC AGCGAATCCT TGCCAGCAAG CGTTTCGAGG TGCGTCAGCC GCTGGTAGAT ACGCAGGTTT CGGCCGTGGT GGCCGGCTTC GGCGTGGCCA ACGATCAACT CGCCGCGCAG GTGGTGAACT GGACCGTGGC GCAAAGTGCT CAGGCTCAGG CAAAGAACCA GTAG
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Protein sequence | MKLSLRLLAL TAALSLSAAC SILPQSEPVD IYRLPVNQAS HSATPVPWSL RLNKPLASEV LAGPRIAVIP KGDVVSSYKG ARWSDPVPLL LRNRLLDGFQ RDGRVQRLSA DDSNLQADYE LAGELQAFQS EYRPTGTVEV VIRYDARLVQ GRSQRILASK RFEVRQPLVD TQVSAVVAGF GVANDQLAAQ VVNWTVAQSA QAQAKNQ
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