Gene PputW619_5088 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_5088 
Symbol 
ID6114090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp5645052 
End bp5645675 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content65% 
IMG OID641624912 
Producthypothetical protein 
Protein accessionYP_001751933 
Protein GI170724245 
COG category[R] General function prediction only 
COG ID[COG3218] ABC-type uncharacterized transport system, auxiliary component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.33903 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0631023 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTGT CGCTGCGCCT GCTGGCCTTG ACGGCCGCGC TGAGCCTGTC TGCCGCCTGC 
TCGATCCTGC CCCAGAGCGA GCCTGTGGAT ATCTACCGGC TACCGGTCAA CCAAGCCAGC
CACAGCGCGA CCCCGGTGCC ATGGTCGTTA CGCTTGAACA AGCCGCTGGC AAGCGAAGTG
CTGGCCGGGC CACGCATCGC TGTGATCCCC AAGGGCGACG TGGTCAGCAG CTACAAAGGC
GCCCGCTGGA GCGACCCGGT GCCGTTGCTG TTACGCAACC GCCTGCTCGA TGGCTTCCAG
CGCGACGGGC GTGTACAGCG TCTGAGCGCC GACGACAGCA ACCTACAGGC CGACTATGAA
CTGGCCGGTG AACTGCAGGC GTTTCAGAGC GAGTACCGGC CAACCGGTAC GGTGGAGGTA
GTGATCCGCT ATGACGCGCG TCTGGTTCAG GGGCGCAGCC AGCGAATCCT TGCCAGCAAG
CGTTTCGAGG TGCGTCAGCC GCTGGTAGAT ACGCAGGTTT CGGCCGTGGT GGCCGGCTTC
GGCGTGGCCA ACGATCAACT CGCCGCGCAG GTGGTGAACT GGACCGTGGC GCAAAGTGCT
CAGGCTCAGG CAAAGAACCA GTAG
 
Protein sequence
MKLSLRLLAL TAALSLSAAC SILPQSEPVD IYRLPVNQAS HSATPVPWSL RLNKPLASEV 
LAGPRIAVIP KGDVVSSYKG ARWSDPVPLL LRNRLLDGFQ RDGRVQRLSA DDSNLQADYE
LAGELQAFQS EYRPTGTVEV VIRYDARLVQ GRSQRILASK RFEVRQPLVD TQVSAVVAGF
GVANDQLAAQ VVNWTVAQSA QAQAKNQ