Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PputW619_5086 |
Symbol | |
ID | 6114088 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas putida W619 |
Kingdom | Bacteria |
Replicon accession | NC_010501 |
Strand | + |
Start bp | 5643322 |
End bp | 5644113 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641624910 |
Product | ABC transporter related |
Protein accession | YP_001751931 |
Protein GI | 170724243 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG1127] ABC-type transport system involved in resistance to organic solvents, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.0940761 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGTGCCC CGGAAGCAGT GATCCAGGCG CGGGGCATCT GCAACCGCTT CGGCAGCCAG AGCGTGCACG AGAACCTCGA TCTGGACCTT TACCGTGGTG AAATCCTGGC CGTGGTTGGC GGATCGGGTA GCGGCAAGTC GGTGCTGCTG CGCAGCATCA TTGGGCTAAG GCTGCCGAAC GAAGGCCAGA TCAAGGTGTT TGGCCAGAAC CTGGCCGGCC TGCATGAAGA GCAACGCTCA TTGGTCGAAC GACGCTTTGG CGTGTTGTTC CAGAAGGGTG CGCTGTTCTC CTCGCTGACC GTCACCGAGA ACGTCGCGTT ACCACTGATC GAGCATGCAG GCCTGTCGCG CGCCGATGCA GAACATCTGG CCGGGGTGAA GCTAGCCTTG GCCGGCCTGC CGATTTCAGC CGCAGACAAG TACCCCTCTT CACTGTCTGG CGGCATGATC AAGCGCGCCG CACTTGCCCG CGCACTGGCC CTGGACCCGG ACATCCTGTT CCTTGACGAA CCCACTGCCG GCCTCGACCC GATCGGCGCC GCCGCCTTCG ACCAACTGAT CCTCACCCTG CGCGACGCCT TGGGCCTGAG CGTGTTCCTC ATCACCCACG ATCTGGACAC GCTCTACACC ATCACTGACC GCATTGCGGT GCTGTCGCAG AAGAAAGTGC TGGTGGCAGG CCCGCTGGCC CAAGTCGAAC AGACCAACGA CCCGTGGATT CACGATTACT TTCACGGCCC ACGCGGGCGG GCGGCTGAAC AGGCCGCCAA CCGTGCCGGG CAGGAGCGCT GA
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Protein sequence | MSAPEAVIQA RGICNRFGSQ SVHENLDLDL YRGEILAVVG GSGSGKSVLL RSIIGLRLPN EGQIKVFGQN LAGLHEEQRS LVERRFGVLF QKGALFSSLT VTENVALPLI EHAGLSRADA EHLAGVKLAL AGLPISAADK YPSSLSGGMI KRAALARALA LDPDILFLDE PTAGLDPIGA AAFDQLILTL RDALGLSVFL ITHDLDTLYT ITDRIAVLSQ KKVLVAGPLA QVEQTNDPWI HDYFHGPRGR AAEQAANRAG QER
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