| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PputW619_5073 |
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| Symbol | |
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| ID | 6114075 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas putida W619 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010501 |
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| Strand | + |
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| Start bp | 5629344 |
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| End bp | 5630837 |
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| Gene Length | 1494 bp |
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| Protein Length | 497 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641624897 |
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| Product | succinate CoA transferase |
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| Protein accession | YP_001751918 |
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| Protein GI | 170724230 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0427] Acetyl-CoA hydrolase |
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| TIGRFAM ID | [TIGR03458] succinate CoA transferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.00240679 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTACCGTG ATCGTATCCG CTTGTCCTCC CTGCACAGCA AGGTAATGAG TGCGGCTGAC
GCCGCTGGCC TGATCGAGGA CGGCATGACC GTCGGCATGA GCGGTTTCAC CCGCGCCGGC
GAAGCCAAGG CCGTACCGCA TGCCTTGGCC GAACGCGCCA AGCTGTCGCC TCTGAAAATC
AGCCTGATGA CCGGCGCCAG CCTGGGCAAT GACCTGGACA AGCAACTGAC CGAGGCCGGC
GTGCTGGCGC GCCGCATGCC GTTCCAGGTC GACAGCACCC TGCGCAAAGC CATCAACGAC
GGTCAGGTGA TGTTCATCGA CCAGCACCTG TCGGAAACCG TCGAGCAACT GCGTAACCAG
CAGCTCAAAC TGCCGGACAT CGCGGTGATC GAAGCGGTGG CCATTACTGA ACAGGGCCAC
ATCGTACCGA CCACCTCGGT GGGCAACTCG GCGAGCTTCG CGATCTTCGC CAAGCAGGTG
ATTGTCGAGA TCAACCTGTC GCACAACGCC AACCTCGAAG GCCTGCACGA CATCTATATC
CCGACCTATC GCCCGACCCG CACGCCGATC CCGCTGGTGA AAGTGGATGA CCGCATCGGC
AGCACCGCGA TCCCGATCGA CCCCGCCAAG ATCGTCGGCA TCGTCATCAG CGATCAGCCA
GATTCGCCCT CCACGGTGCT ACCGCCGGAT GATGAAACCC AGGCCATCGC CGACCACCTG
ATCAACTTCC TCAAGAACGA AGTGGATGCA GGCCGCATGA CCAACAGGCT CGGCCCGCTG
CAAGCCGGCA TCGGCAGCAT CGCCAACGCG GTGATGTGTG GCCTGATCGA CTCGCCGTTC
GAGGACCTGA CCATGTACTC CGAAGTACTT CAGGACTCGA CCTTCGATCT GATCGACGCT
GGCAAGCTGA GTTTTGCCTC AGGCAGCTCT ATCACCCTGT CGGGGCGTCG TAATGCCGAC
GTATTCGGCA ACCTGGAGCG CTACAAGGAC AAGCTGGTAC TGCGCCCGCA GGAGATCTCC
AACCACCCTG AAGTCGTGCG CCGCCTGGGC ATCATCGGCA TCAACACGGC GCTGGAGTTC
GACATCTACG GCAACGTCAA CTCCACGCAC GTCTGTGGCA CCCGGATGAT GAACGGTATC
GGTGGCTCCG GCGATTTCGC CCGAAATGCT CACCTGGCCG TATTCGTCAC CAAGTCGATC
GCCAAAGGCG GGGCGATTTC CAGCGTGGTG CCCATGGTGA GCCATGTCGA CCACACCGAG
CACGACGTGG ACATCCTGGT GACCGAACAG GGGCTCGCCG ACCTGCGGGG CCTCGCGCCA
CGGGAACGGG CACGGGCGAT CATCGATAAC TGTGTCCACC CGGATTACCG TGCAGCGCTG
AACGACTATT TCGATCGCGC TTGCCTGCGT GGCGGCCACA CCCCGCATAT CCTGCGTGAG
GCGCTGAGCT GGCACGAAAA TCTGGAAGAA AGTGGGCGTA TGCTCGCCAG CTGA
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| Protein sequence | MYRDRIRLSS LHSKVMSAAD AAGLIEDGMT VGMSGFTRAG EAKAVPHALA ERAKLSPLKI
SLMTGASLGN DLDKQLTEAG VLARRMPFQV DSTLRKAIND GQVMFIDQHL SETVEQLRNQ
QLKLPDIAVI EAVAITEQGH IVPTTSVGNS ASFAIFAKQV IVEINLSHNA NLEGLHDIYI
PTYRPTRTPI PLVKVDDRIG STAIPIDPAK IVGIVISDQP DSPSTVLPPD DETQAIADHL
INFLKNEVDA GRMTNRLGPL QAGIGSIANA VMCGLIDSPF EDLTMYSEVL QDSTFDLIDA
GKLSFASGSS ITLSGRRNAD VFGNLERYKD KLVLRPQEIS NHPEVVRRLG IIGINTALEF
DIYGNVNSTH VCGTRMMNGI GGSGDFARNA HLAVFVTKSI AKGGAISSVV PMVSHVDHTE
HDVDILVTEQ GLADLRGLAP RERARAIIDN CVHPDYRAAL NDYFDRACLR GGHTPHILRE
ALSWHENLEE SGRMLAS
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