Gene PputW619_5056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPputW619_5056 
Symbol 
ID6114049 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas putida W619 
KingdomBacteria 
Replicon accessionNC_010501 
Strand
Start bp5580587 
End bp5581450 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content63% 
IMG OID641624871 
ProductABC transporter related 
Protein accessionYP_001751901 
Protein GI170724213 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCC CATTGCCAGG CCACACGGCC AGCAACCTTA GCCGTGTGGC TACACCGCCG 
TTGCTCAAGG TGGATAACCT CAGCCTCGAA TACCGTACCG CGCAGCGCGT GGTGCGGGCC
ACCCATCAGG TCAGCTTCGA AGTCGATCGT GCCGACCGTT TTGTCTTGCT GGGCCCCTCG
GGGTGTGGCA AGTCCACGCT GCTCAAGGCC GTAGCCGGGT TCATCAGCCC ACAGCAAGGG
CAGATCCTGC TGCAGGGCCA GCCGGTCAAC GGCCCTGGCC CCGATCGCAT CGTGGTGTTC
CAGGAGTTTG ACCAGCTGCC GCCGTGGAAG ACGGTGAAGC AGAACGTCAT GTTCCCGCTG
CTCGTTTCTG GCCAGCTCAA GCGCGCCGAG GCCGAAGACC GAGCGTTGCA TTACCTGGAC
AAGGTTGGCC TGGCGGCTTT TGCCGACGCT TATCCGCATA CCCTGTCGGG TGGCATGAAA
GCGCGCGTGG CAATTGCTCG TGCACTGGCC ACGCAACCGA AGATCCTGTT GATGGACGAG
CCGTTCGCCG CACTCGATGC GCTTACCCGG CGCAAGATGC AGGAAGAGTT GCTGCTGCTG
TGGGAGGAGG TGCGCTTCAC CTTGCTGTTC GTCACCCATT CCATCGAGGA GGCGCTGGTA
GTGGGTAACC GCATCCTGTT GCTGTCACCC CATCCGGGGC GGGTACGGGC CGAGGTGCAC
AGCCATCAGT ACGACCTCGG CAGCCTCGGC GCCAGTGACT TCCAGGCCAG CGCCCGGCGC
ATCCATCGGC TGTTGTTCGA CGAGGTCGAT ACCCCCGAGC AGGCAGAATA CCTGGGCTTC
AACGACATCC GCATTGCCTA CTGA
 
Protein sequence
MTAPLPGHTA SNLSRVATPP LLKVDNLSLE YRTAQRVVRA THQVSFEVDR ADRFVLLGPS 
GCGKSTLLKA VAGFISPQQG QILLQGQPVN GPGPDRIVVF QEFDQLPPWK TVKQNVMFPL
LVSGQLKRAE AEDRALHYLD KVGLAAFADA YPHTLSGGMK ARVAIARALA TQPKILLMDE
PFAALDALTR RKMQEELLLL WEEVRFTLLF VTHSIEEALV VGNRILLLSP HPGRVRAEVH
SHQYDLGSLG ASDFQASARR IHRLLFDEVD TPEQAEYLGF NDIRIAY